PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG001260.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 271aa MW: 29722.9 Da PI: 7.8989 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 21.4 | 5.6e-07 | 245 | 265 | 1 | 21 |
G2-like 1 kprlrWtpeLHerFveaveqL 21 k++l+Wt e+He Fv+av+qL TRIDC6AG001260.6 245 KKKLEWTAEMHELFVNAVTQL 265 689*****************9 PP | |||||||
2 | Response_reg | 42.5 | 3.4e-15 | 74 | 181 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalea 89 vl vdD+p+ ++ l+q+l++ gy ev++ ++ +a++ ++++ D i++ ++ g mdGl llk++ ++ + ++++++++++e++++ TRIDC6AG001260.6 74 VLAVDDDPIYLHSLTQMLRRCGY-EVTAKLSPADAVREVEKNPnrTDFIMTVVQTRGrgMDGLGLLKRLGKRY--PVVLMFSGEESMETRIRG 163 799********************.6665555555665555554489*999999998888**********7766..6999************** PP HHTTESEEEESS--HHHH CS Response_reg 90 lkaGakdflsKpfdpeel 107 + Ga l+Kp ++ TRIDC6AG001260.6 164 NQGGACYLLEKPLRDTQI 181 ************999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
VTAVHASLYS WCCCKVLSLH AGAAVKFCLF VLAVAGHSTL RADEHEFDAH AAAMANGDQD 60 MATDELMETE GLKVLAVDDD PIYLHSLTQM LRRCGYEVTA KLSPADAVRE VEKNPNRTDF 120 IMTVVQTRGR GMDGLGLLKR LGKRYPVVLM FSGEESMETR IRGNQGGACY LLEKPLRDTQ 180 IYFLWQHVVR WRLNAAAAAT ANANPHHSLG VHLDDSQRKR GQGVNDSNKG KGASEGGLQL 240 GTTKKKKLEW TAEMHELFVN AVTQLKTTGG A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 3e-16 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG001260.6 |