PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001260.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 281aa    MW: 30998.4 Da    PI: 7.3266
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001260.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.26.4e-07245265121
           G2-like   1 kprlrWtpeLHerFveaveqL 21 
                       k++l+Wt e+He Fv+av+qL
  TRIDC6AG001260.5 245 KKKLEWTAEMHELFVNAVTQL 265
                       689*****************9 PP
2Response_reg42.43.7e-15741811107
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalea 89 
                       vl vdD+p+ ++ l+q+l++ gy ev++  ++ +a++ ++++    D i++ ++  g  mdGl llk++ ++   + ++++++++++e++++ 
  TRIDC6AG001260.5  74 VLAVDDDPIYLHSLTQMLRRCGY-EVTAKLSPADAVREVEKNPnrTDFIMTVVQTRGrgMDGLGLLKRLGKRY--PVVLMFSGEESMETRIRG 163
                       799********************.6665555555665555554489*999999998888**********7766..6999************** PP

                       HHTTESEEEESS--HHHH CS
      Response_reg  90 lkaGakdflsKpfdpeel 107
                        + Ga   l+Kp    ++
  TRIDC6AG001260.5 164 NQGGACYLLEKPLRDTQI 181
                       ************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
VTAVHASLYS WCCCKVLSLH AGAAVKFCLF VLAVAGHSTL RADEHEFDAH AAAMANGDQD  60
MATDELMETE GLKVLAVDDD PIYLHSLTQM LRRCGYEVTA KLSPADAVRE VEKNPNRTDF  120
IMTVVQTRGR GMDGLGLLKR LGKRYPVVLM FSGEESMETR IRGNQGGACY LLEKPLRDTQ  180
IYFLWQHVVR WRLNAAAAAT ANANPHHSLG VHLDDSQRKR GQGVNDSNKG KGASEGGLQL  240
GTTKKKKLEW TAEMHELFVN AVTQLKTTGD EKLFVIKEEA T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.16e-16ARR-B family protein