PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG082470.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 25292.4 Da PI: 8.3898 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.6e-31 | 52 | 110 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp++++itY+ eHnh+ TRIDC5BG082470.2 52 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRSDPNMLVITYTAEHNHP 110 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
PAPHHQMITS YCGMACTHIP YCRKNDVRKV VCIPAPPVMS NRAGGGGEVI PSDLWAWRKY 60 GQKPIKGSPY PRGYYRCSSS KGCLARKQVE RSRSDPNMLV ITYTAEHNHP WPMQRNVLAG 120 YARAHTHAAA KKQQKISSSS SADNAASSSS SNSFHVEQIN PICGDQLPVS CKMPDSTATA 180 GDGGGLLFEG IQPDEVFAEL EELETDNNPM MTSANVYGSR GVSSNYEWHK F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 8e-55 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG082470.2 |