PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG077670.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 797aa MW: 89004.3 Da PI: 6.3598

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG077670.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	127.7	4.7e-40	3	84	37	118
CG-1 37 gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+L++rk++r frkDG++w+kkk+g tv+E+he+L g+++vl+cyYah+e+n +fqrr+yw+Lee++ +ivlvhylevk TRIDC5BG077670.7 3 GSLFLFDRKVLRLFRKDGHNWRKKKNGTTVKEAHERLTSGSIDVLHCYYAHGEDNINFQRRSYWMLEEDYMHIVLVHYLEVK 84 9******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
VGGSLFLFDR KVLRLFRKDG HNWRKKKNGT TVKEAHERLT SGSIDVLHCY YAHGEDNINF 60 QRRSYWMLEE DYMHIVLVHY LEVKLPSGND GTSTECLQLP SAIDGTTTEF QLPSATDSTF 120 ATVDSFEQNN KLLGEAINFP VLKTQSSNLS DMLKDSFKRS DSFARWMSKE LAEVDDSQVK 180 SSSGLYRNSE DADNIIGASR HDQLDWFTLD PMVAQDQLFS ITEFFPSWTY AGSKTRVLVT 240 GSFLTSDKVI KLKWSCMFGE VEVPADILAD GTLRCYSPPH KPGRVPFYVT CSNKLACSEV 300 REFEYRPSDS QYMDAPSPHG ATNKIYLQAR LDELLSLGQD EQDKFQAALS GPKKELIDLN 360 KKITSLMTDN DPWSELLKFA DDNQLAPDDR QDQFVESSIK EKLHIWLLHK AGGGGKDPSV 420 LDEEGQGVLH LAAALGYDWV IRPTITAGVS INFRDVHGWT ALHWAAFCGR ERTVVALIAL 480 GAAPGALTDP RPDFPSGRTP ADLASFNGHK GISGFLAEFS LTSHLQTLNL KEAMGSNASE 540 ISGLPGIGDV TGRIASPSAG QGLQAGLMGD SLGAVRNAAQ AAARIFQVFR VQSFQRKQAV 600 QYEDDNGVIS YERAMSLLSY KPSKPGQFDP MHAAAARIQN KFRGWKGRKE FLLIRQRIVK 660 IQAHVRGHQV SKHYRKIIWS IGIMENVILR WRQQGAGLRG FRSTEGATDS STSSSSVDVI 720 PVKPAEDDYN FLQDGRKQAE ERLQRALARV KSMVRYPEAR DQDQRILTVV TKMQESQLVE 780 ETLLEESTEM DEGFFDE

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

VGGSLFLFDR KVLRLFRKDG HNWRKKKNGT TVKEAHERLT SGSIDVLHCY YAHGEDNINF  60
QRRSYWMLEE DYMHIVLVHY LEVKLPSGND GTSTECLQLP SAIDGTTTEF QLPSATDSTF  120
ATVDSFEQNN KLLGEAINFP VLKTQSSNLS DMLKDSFKRS DSFARWMSKE LAEVDDSQVK  180
SSSGLYRNSE DADNIIGASR HDQLDWFTLD PMVAQDQLFS ITEFFPSWTY AGSKTRVLVT  240
GSFLTSDKVI KLKWSCMFGE VEVPADILAD GTLRCYSPPH KPGRVPFYVT CSNKLACSEV  300
REFEYRPSDS QYMDAPSPHG ATNKIYLQAR LDELLSLGQD EQDKFQAALS GPKKELIDLN  360
KKITSLMTDN DPWSELLKFA DDNQLAPDDR QDQFVESSIK EKLHIWLLHK AGGGGKDPSV  420
LDEEGQGVLH LAAALGYDWV IRPTITAGVS INFRDVHGWT ALHWAAFCGR ERTVVALIAL  480
GAAPGALTDP RPDFPSGRTP ADLASFNGHK GISGFLAEFS LTSHLQTLNL KEAMGSNASE  540
ISGLPGIGDV TGRIASPSAG QGLQAGLMGD SLGAVRNAAQ AAARIFQVFR VQSFQRKQAV  600
QYEDDNGVIS YERAMSLLSY KPSKPGQFDP MHAAAARIQN KFRGWKGRKE FLLIRQRIVK  660
IQAHVRGHQV SKHYRKIIWS IGIMENVILR WRQQGAGLRG FRSTEGATDS STSSSSVDVI  720
PVKPAEDDYN FLQDGRKQAE ERLQRALARV KSMVRYPEAR DQDQRILTVV TKMQESQLVE  780
ETLLEESTEM DEGFFDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG077670.7