PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG077670.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 863aa MW: 96579 Da PI: 6.5179

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG077670.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	167	3.1e-52	34	150	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r frkDG++w+kkk+g tv+E+he+L g+++vl+cyYah+e+n +f TRIDC5BG077670.6 34 KEaQTRWLRPTEICEILKNYRNFHIAPEPPNMPASGSLFLFDRKVLRLFRKDGHNWRKKKNGTTVKEAHERLTSGSIDVLHCYYAHGEDNINF 126 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC5BG077670.6 127 QRRSYWMLEEDYMHIVLVHYLEVK 150 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
GSCMHTIALP KGGSSCWEAQ SYKIKTTDME QILKEAQTRW LRPTEICEIL KNYRNFHIAP 60 EPPNMPASGS LFLFDRKVLR LFRKDGHNWR KKKNGTTVKE AHERLTSGSI DVLHCYYAHG 120 EDNINFQRRS YWMLEEDYMH IVLVHYLEVK LPSGNDGTST ECLQLPSAID GTTTEFQLPS 180 ATDSTFATVD SFEQNNKLLG EAINFPVLKT QSSNLSDMLK DSFKRSDSFA RWMSKELAEV 240 DDSQVKSSSG LYRNSEDADN IIGASRHDQL DWFTLDPMVA QDQLFSITEF FPSWTYAGSK 300 TRVLVTGSFL TSDKVIKLKW SCMFGEVEVP ADILADGTLR CYSPPHKPGR VPFYVTCSNK 360 LACSEVREFE YRPSDSQYMD APSPHGATNK IYLQARLDEL LSLGQDEQDK FQAALSGPKK 420 ELIDLNKKIT SLMTDNDPWS ELLKFADDNQ LAPDDRQDQF VESSIKEKLH IWLLHKAGGG 480 GKDPSVLDEE GQGVLHLAAA LGYDWVIRPT ITAGVSINFR DVHGWTALHW AAFCGRERTV 540 VALIALGAAP GALTDPRPDF PSGRTPADLA SFNGHKGISG FLAEFSLTSH LQTLNLKEAM 600 GSNASEISGL PGIGDVTGRI ASPSAGQGLQ AGLMGDSLGA VRNAAQAAAR IFQVFRVQSF 660 QRKQAVQYED DNGVISYERA MSLLSYKPSK PGQFDPMHAA AARIQNKFRG WKGRKEFLLI 720 RQRIVKIQAH VRGHQVSKHY RKIIWSIGIM ENVILRWRQQ GAGLRGFRST EGATDSSTSS 780 SSVDVIPVKP AEDDYNFLQD GRKQAEERLQ RALARVKSMV RYPEARDQDQ RILTVVTKMQ 840 ESQLVEETLL EESTEMDEGF FDE

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

GSCMHTIALP KGGSSCWEAQ SYKIKTTDME QILKEAQTRW LRPTEICEIL KNYRNFHIAP  60
EPPNMPASGS LFLFDRKVLR LFRKDGHNWR KKKNGTTVKE AHERLTSGSI DVLHCYYAHG  120
EDNINFQRRS YWMLEEDYMH IVLVHYLEVK LPSGNDGTST ECLQLPSAID GTTTEFQLPS  180
ATDSTFATVD SFEQNNKLLG EAINFPVLKT QSSNLSDMLK DSFKRSDSFA RWMSKELAEV  240
DDSQVKSSSG LYRNSEDADN IIGASRHDQL DWFTLDPMVA QDQLFSITEF FPSWTYAGSK  300
TRVLVTGSFL TSDKVIKLKW SCMFGEVEVP ADILADGTLR CYSPPHKPGR VPFYVTCSNK  360
LACSEVREFE YRPSDSQYMD APSPHGATNK IYLQARLDEL LSLGQDEQDK FQAALSGPKK  420
ELIDLNKKIT SLMTDNDPWS ELLKFADDNQ LAPDDRQDQF VESSIKEKLH IWLLHKAGGG  480
GKDPSVLDEE GQGVLHLAAA LGYDWVIRPT ITAGVSINFR DVHGWTALHW AAFCGRERTV  540
VALIALGAAP GALTDPRPDF PSGRTPADLA SFNGHKGISG FLAEFSLTSH LQTLNLKEAM  600
GSNASEISGL PGIGDVTGRI ASPSAGQGLQ AGLMGDSLGA VRNAAQAAAR IFQVFRVQSF  660
QRKQAVQYED DNGVISYERA MSLLSYKPSK PGQFDPMHAA AARIQNKFRG WKGRKEFLLI  720
RQRIVKIQAH VRGHQVSKHY RKIIWSIGIM ENVILRWRQQ GAGLRGFRST EGATDSSTSS  780
SSVDVIPVKP AEDDYNFLQD GRKQAEERLQ RALARVKSMV RYPEARDQDQ RILTVVTKMQ  840
ESQLVEETLL EESTEMDEGF FDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-180	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG077670.6