PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG076500.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 139aa MW: 15098.9 Da PI: 9.8663 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.8 | 1.2e-41 | 48 | 125 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls ak+yhrrhkvCe+h+ka++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ TRIDC5BG076500.6 48 ACQVEGCCADLSAAKDYHRRHKVCEMHAKANTAVVGNTVQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTRP 125 5**************************************************************************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
VGNSNNVLSL RIGGSSVAGG TAEDGGVNEE DRNGKKIRVQ GGSSSGPACQ VEGCCADLSA 60 AKDYHRRHKV CEMHAKANTA VVGNTVQRFC QQCSRFHLLQ EFDEGKRSCR RRLAGHNKRR 120 RKTRPENAVG GTPIEEKLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 1e-47 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG076500.6 |