PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG076500.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 961aa MW: 105051 Da PI: 5.571 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 127.9 | 3.8e-40 | 153 | 230 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls ak+yhrrhkvCe+h+ka++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ TRIDC5BG076500.4 153 ACQVEGCCADLSAAKDYHRRHKVCEMHAKANTAVVGNTVQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTRP 230 5**************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 961 aa Download sequence |
MEAARVGSQS RHLYGGGLGG VLEQARREKR VFGWDLNDWS WDSERFVATP VPAAVGNGLS 60 LNSTPSSSEE AEAEVARNGN GRVDSDKRKR VVVIHDDEDE KDEDPVGNSN NVLSLRIGGS 120 SVAGGTAEDG GVNEEDRNGK KIRVQGGSSS GPACQVEGCC ADLSAAKDYH RRHKVCEMHA 180 KANTAVVGNT VQRFCQQCSR FHLLQEFDEG KRSCRRRLAG HNKRRRKTRP ENAVGGTPIE 240 EKVSSYLLLS LLGICANLNS DNAEHLQGQE LLSNLWRNLG NVAKSLDPKE LCKLLEACQS 300 MQNRSNAGTS EAANALVNTA AAEAAGPSNS KAPFANGGDC GQTSSAVLPV QSNATMVATT 360 ETPACKFRNF DLNDTCNDME GFEDGSNCPS WIRQDSTQSP PQTSGNSDST SAQSLSSSNG 420 DAQCRTDKIV FKLFEKVPSE LPPILRSQIL GWLSSSPTDI ESHIRPGCII LTVYLRLVES 480 SWRELSENMS VYLDKLSSSS ADNFWTSGLV FVMVRHQIAF MHNGQVMLDR PLAPNSHHYC 540 KVLCVSPVAA PYSATVNFRV EGFNLVSSSS RLICSIEGRC IFEEDTSIMA DDTEDEDIEY 600 LNFCCSLPGT RGRGFIEVED SGFSNGFFPF IVAEQNVCSE VCELESIFKS SSLEQPDNDI 660 AMNQALEFLH ELGWLLHRVN IISKHDKVEP PVPAFNLLRF RNLGIFAMER EWCAVTKMLL 720 DLLFDGFVDA GLQSPKDVVL SENLLHSAVR GKSARMVRFL LTYKPNKNLK ETAETYLFRP 780 DAQGPSAFTP LHIAAATSDA EDVLDALTDD PGLVGLNAWR NARDEIGFTP EDYARQSGND 840 AYINLVQKKI DKHLGKGHVV LGVPSSMCPG ITDGMKAGDI SLEICKAMPM TTTSAARCNI 900 CSCQGKMYPN SLARTFLYRP AMFTVMGVAV ICVCVGILLH TLPKVYAAPN FRWELLERGA 960 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG076500.4 |