PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG076500.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 494aa MW: 53510.3 Da PI: 6.2444

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG076500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.2	1.5e-40	153	230	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls ak+yhrrhkvCe+h+ka++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ TRIDC5BG076500.1 153 ACQVEGCCADLSAAKDYHRRHKVCEMHAKANTAVVGNTVQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTRP 230 5**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MEAARVGSQS RHLYGGGLGG VLEQARREKR VFGWDLNDWS WDSERFVATP VPAAVGNGLS 60 LNSTPSSSEE AEAEVARNGN GRVDSDKRKR VVVIHDDEDE KDEDPVGNSN NVLSLRIGGS 120 SVAGGTAEDG GVNEEDRNGK KIRVQGGSSS GPACQVEGCC ADLSAAKDYH RRHKVCEMHA 180 KANTAVVGNT VQRFCQQCSR FHLLQEFDEG KRSCRRRLAG HNKRRRKTRP ENAVGGTPIE 240 EKVSSYLLLS LLGICANLNS DNAEHLQGQE LLSNLWRNLG NVAKSLDPKE LCKLLEACQS 300 MQNRSNAGTS EAANALVNTA AAEAAGPSNS KAPFANGGDC GQTSSAVLPV QSNATMVATT 360 ETPACKFRNF DLNDTCNDME GFEDGSNCPS WIRQDSTQSP PQTSGNSDST SAQSLSSSNG 420 DAQCRTDKIV FKLFEKVPSE LPPILRSQIL GWLSSSPTDI ESHIRPGCII LTVYLRLVES 480 SWREVHFFHD HFMS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MEAARVGSQS RHLYGGGLGG VLEQARREKR VFGWDLNDWS WDSERFVATP VPAAVGNGLS  60
LNSTPSSSEE AEAEVARNGN GRVDSDKRKR VVVIHDDEDE KDEDPVGNSN NVLSLRIGGS  120
SVAGGTAEDG GVNEEDRNGK KIRVQGGSSS GPACQVEGCC ADLSAAKDYH RRHKVCEMHA  180
KANTAVVGNT VQRFCQQCSR FHLLQEFDEG KRSCRRRLAG HNKRRRKTRP ENAVGGTPIE  240
EKVSSYLLLS LLGICANLNS DNAEHLQGQE LLSNLWRNLG NVAKSLDPKE LCKLLEACQS  300
MQNRSNAGTS EAANALVNTA AAEAAGPSNS KAPFANGGDC GQTSSAVLPV QSNATMVATT  360
ETPACKFRNF DLNDTCNDME GFEDGSNCPS WIRQDSTQSP PQTSGNSDST SAQSLSSSNG  420
DAQCRTDKIV FKLFEKVPSE LPPILRSQIL GWLSSSPTDI ESHIRPGCII LTVYLRLVES  480
SWREVHFFHD HFMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	8e-88	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG076500.1