PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG074280.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 461aa    MW: 52218.3 Da    PI: 9.1548
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG074280.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.81.2e-10721353298
                        --SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  32 esktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         ++t  + ++ g ++W vk+  ++  ++ +l++GW +Fv a+g+ +g  +v++++   ++ l++k+f+
  TRIDC5BG074280.12  72 DGRTALVLSPFGkNVWPVKV--DRDAKGAFLGDGWPQFVAAHGIGVGWYLVIRHE--GCGVLTLKAFN 135
                        344555666555599*****..*******************************65..57778888776 PP
2B345.81.1e-143944503286
                        --SEEEEEE.TTS-EEEEEE.....EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3  32 esktltled.esgrsWevkliy...rkksgr..yvltkGWkeFvkangLkegDfvvFkldg 86 
                        +  ++tl++ e+++sWev+        +  r    lt+GWk F+k+n+Lk+gD+++Fk+++
  TRIDC5BG074280.12 394 C--KITLKSvERNKSWEVEGVNyhpGTN--RsyNCLTRGWKAFCKENELKAGDICTFKVIK 450
                        3..7999998999******944455333..34489***********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
GGRRPTASAR KEQGRKGRRW WNFFLGSVKA MGLSSNCAKT IKVQQCVKLP DSNYLHIDDE  60
LAGCFGTEDH GDGRTALVLS PFGKNVWPVK VDRDAKGAFL GDGWPQFVAA HGIGVGWYLV  120
IRHEGCGVLT LKAFNSSFVI KEFGLTITVL SPAEIENAFA RKPQFIVPLQ RSFMEKMPIP  180
PEFLQRGYIS EEDLNRPRPI ATFLTSWHIE LKKDGPNVFF TGSEWPKFLA YFEIAETDVL  240
LIKYQGCMNF SFETFPNGNN EHTEEKISSS QQSEQSQCQE EEHVSTRRRT QSSGITPGAQ  300
SQEEEHVSTR TRKQNNGKTP GAQSQEEEHV CSRKRKQSEV KSMLDGPTTS QHRKKALCEL  360
GSTGSQAWLR KEINGLALKR YLHFPARFGF LERCKITLKS VERNKSWEVE GVNYHPGTNR  420
SYNCLTRGWK AFCKENELKA GDICTFKVIK STLWHVVIDR C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1332337SRKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.18e-07B3 family protein