PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG068200.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 375aa MW: 40364 Da PI: 9.3054

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG068200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93	2.2e-29	303	361	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YYrC+s +Cp++k+ver++ d ++++tYe++Hnh TRIDC5BG068200.1 303 SDSYSWRKYGQKPIKGSPHPRGYYRCSSIkDCPARKHVERCRGDAGMLIVTYENDHNHA 361 69**********************9988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MEGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAVAAETE EAVSRFSKVV NILGNRVGHA 60 RARVGRRSSP AGDPIARCLL EYHPPPPVPY CPPASAPQLH GSSSSTPAPP TPLKQMAVPV 120 AAAAAPCATD RDMFFQTPLL DLSGCSVTPA SIAAVQINGS RVSAAPQKRM LEQQQRPASS 180 DNKRFHFEPK PASEKPFHIE IPAARSGKEP EVITFSFDNS VCTSSAATSF FTNMSSQLIS 240 MSETSACAPA SRKAAHKADD DGKCHCPKKK SVPVAYAIDL LKPREKRVVR MPAVSDKVAD 300 IPSDSYSWRK YGQKPIKGSP HPRGYYRCSS IKDCPARKHV ERCRGDAGML IVTYENDHNH 360 AQPLDLATLT ANSEV

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MEGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAVAAETE EAVSRFSKVV NILGNRVGHA  60
RARVGRRSSP AGDPIARCLL EYHPPPPVPY CPPASAPQLH GSSSSTPAPP TPLKQMAVPV  120
AAAAAPCATD RDMFFQTPLL DLSGCSVTPA SIAAVQINGS RVSAAPQKRM LEQQQRPASS  180
DNKRFHFEPK PASEKPFHIE IPAARSGKEP EVITFSFDNS VCTSSAATSF FTNMSSQLIS  240
MSETSACAPA SRKAAHKADD DGKCHCPKKK SVPVAYAIDL LKPREKRVVR MPAVSDKVAD  300
IPSDSYSWRK YGQKPIKGSP HPRGYYRCSS IKDCPARKHV ERCRGDAGML IVTYENDHNH  360
AQPLDLATLT ANSEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	9e-45	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG068200.1