PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG068130.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 239aa MW: 26077.9 Da PI: 5.0683 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 55.8 | 1.2e-17 | 55 | 111 | 26 | 85 |
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 + +p+W++v++++r++g+er+++qC+++w+nl++++kkike+e+ + + p f + TRIDC5BG068130.4 55 ALEPKWSAVAEYCRRHGVERGAVQCRKRWSNLAGDWKKIKEWERAAAGA---REPSFWAM 111 5589****************************************86333...34667666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
CPAPATPPAR RPRRRPTRRC APRGCPAGRG RRYWCSSRAS AWLKSAAAGE TAAAALEPKW 60 SAVAEYCRRH GVERGAVQCR KRWSNLAGDW KKIKEWERAA AGAREPSFWA MRNDARRERR 120 LPGFFDREVY GILEGRGRGV VAGSSSGGGA AVEEVGVVRM EEDDEEEETG EEEEERGKGK 180 EVAVAVAVKE TVFDSGRPAG EEVLFSEDEE EEDAETPEAT PAPPPAVIAL PISENSEAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 10 | 15 | RRPRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-34 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG068130.4 |