PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG068130.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 364aa MW: 39081.2 Da PI: 4.9039

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG068130.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	72.6	6.8e-23	27	128	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk....................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 rWt+qe+l+Lie++r +e r + + + +p+W++v++++r++g+er+++qC+++w+nl++++kkike+e+ + TRIDC5BG068130.2 27 RWTRQEILVLIEGKRMVEVRGGVRGgrgrlaaaaaagatgetaaaALEPKWSAVAEYCRRHGVERGAVQCRKRWSNLAGDWKKIKEWERAAAG 119 8************88887774322355666777777778887788****************************************8633 PP trihelix 74 essstcpyfdql 85 + p f + TRIDC5BG068130.2 120 A---REPSFWAM 128 2...34666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MSSAGDPAGA AAAAAPNPSV RAPRLPRWTR QEILVLIEGK RMVEVRGGVR GGRGRLAAAA 60 AAGATGETAA AALEPKWSAV AEYCRRHGVE RGAVQCRKRW SNLAGDWKKI KEWERAAAGA 120 REPSFWAMRN DARRERRLPG FFDREVYGIL EGRGRGVVAG SSSGGGAAVE EVGVVRMEED 180 DEEEETGEEE EERGKGKEVA VAVAVKETVF DSGRPAGEEV LFSEDEEEED AETPEATPAP 240 PPAVIALPIS ENSEASRQQS AQQGTTKGRQ GGHQGSTKTA GSPTLQQSGE KRRRTGDDGE 300 PRAEGIADKL LEILERNSQI MTAQLEAQNV NSERDREERR EQANSLAVVL GRLADALGRI 360 ADKL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MSSAGDPAGA AAAAAPNPSV RAPRLPRWTR QEILVLIEGK RMVEVRGGVR GGRGRLAAAA  60
AAGATGETAA AALEPKWSAV AEYCRRHGVE RGAVQCRKRW SNLAGDWKKI KEWERAAAGA  120
REPSFWAMRN DARRERRLPG FFDREVYGIL EGRGRGVVAG SSSGGGAAVE EVGVVRMEED  180
DEEEETGEEE EERGKGKEVA VAVAVKETVF DSGRPAGEEV LFSEDEEEED AETPEATPAP  240
PPAVIALPIS ENSEASRQQS AQQGTTKGRQ GGHQGSTKTA GSPTLQQSGE KRRRTGDDGE  300
PRAEGIADKL LEILERNSQI MTAQLEAQNV NSERDREERR EQANSLAVVL GRLADALGRI  360
ADKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-42	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG068130.2