PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG067490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 344aa MW: 39716.2 Da PI: 6.194

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG067490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.8	1.3e-15	36	115	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +++p + +++++g+ + +++le+++g s + + k++++ v+t GW++Fv+ +L+ gD+++F+++g+ +f +v++f+k TRIDC5BG067490.1 36 DAMMIPEEVVRRFKGE--IPGEIKLETRNGYSHAIVV--AKNQEKLVFTVGWRQFVEIYDLQIGDSLMFRYKGNCQF--NVMIFDK 115 569********877..5558***********..********************************9999..9999987 PP
2	B3	42.4	1.2e-13	182	262	12	98
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ +++p +f+++++g+ +++++le+++ rs+ + + k+ g vlt GW +Fv gL+ gD++v++++g+s+f +v +f+ TRIDC5BG067490.1 182 FQHEMIIPEEFVQRFKGE--FPREMILETQNCRSYVIGV--AKNNGNLVLTVGWGKFVGIFGLEMGDTIVLRYIGNSRF--NVIIFD 262 4678*********888..7789***********..********************************9999..887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGTTFGSSKL QDEQYYKHLD DERKYFLVLM LGDFEDAMMI PEEVVRRFKG EIPGEIKLET 60 RNGYSHAIVV AKNQEKLVFT VGWRQFVEIY DLQIGDSLMF RYKGNCQFNV MIFDKHGREK 120 ALSVVLDPFL HPVQDRSNEA HEIGSSKKMD VPWERCKSRT EYHYANLDDE KKYFSVHMMG 180 DFQHEMIIPE EFVQRFKGEF PREMILETQN CRSYVIGVAK NNGNLVLTVG WGKFVGIFGL 240 EMGDTIVLRY IGNSRFNVII FDELGCEKVS SVFVDPSPPP VQERRTSATD TVKSSHFRPQ 300 AIQTQAFSIR KEMPMESRHL QMETDKSCQD KNTVISTSSC ESSG

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGTTFGSSKL QDEQYYKHLD DERKYFLVLM LGDFEDAMMI PEEVVRRFKG EIPGEIKLET  60
RNGYSHAIVV AKNQEKLVFT VGWRQFVEIY DLQIGDSLMF RYKGNCQFNV MIFDKHGREK  120
ALSVVLDPFL HPVQDRSNEA HEIGSSKKMD VPWERCKSRT EYHYANLDDE KKYFSVHMMG  180
DFQHEMIIPE EFVQRFKGEF PREMILETQN CRSYVIGVAK NNGNLVLTVG WGKFVGIFGL  240
EMGDTIVLRY IGNSRFNVII FDELGCEKVS SVFVDPSPPP VQERRTSATD TVKSSHFRPQ  300
AIQTQAFSIR KEMPMESRHL QMETDKSCQD KNTVISTSSC ESSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	8e-12	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG067490.1