PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064860.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 243aa    MW: 26771.4 Da    PI: 8.3444
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064860.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.93.7e-1857103455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC5BG064860.8  57 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 103
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
FGGSGLPSES GGHAHKRKGR GKDDYDSRSE DVECEATEET KSSRRHGSKR RSRAAEVHNQ  60
SERRRRDRIN EKMRSLQELI PHCNKADKAS ILDEAIEYLK SLQMQVQIMW MTTGMAPMMF  120
PGAHQFMPPM AVGMNSACMP AAQGLNQMAR MPYMNHSLSN HIPMNPSPAM NPMYIANQMQ  180
NIQLREASNH FLHPDSGLAV APQVAGPYAY TPQVAPKSQI PEVPDCTVAP ISGPGQPPAP  240
DGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14966KRRSRAAEVHNQSERRRR
26267ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-32bHLH family protein