PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064860.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 252aa    MW: 26967 Da    PI: 10.6773
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064860.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.11.2e-06911123455
                       TTS-STCHHHHHHHHHHHHHHH CS
               HLH  34 pskKlsKaeiLekAveYIksLq 55 
                       ++++ +Ka+iL +A+eY+ksLq
  TRIDC5BG064860.4  91 TATRADKASILDEAIEYLKSLQ 112
                       6799*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
RRPAGPGATS GAPACRARAA AMPTRGRGGA KTTTIAAARM WSVRRPRRPN RRGDTGRSGG  60
AEQLKFITSQ RGDEGTGSTK RCGHFKNSYP TATRADKASI LDEAIEYLKS LQMQVQIMWM  120
TTGMAPMMFP GAHQFMPPMA VGMNSACMPA AQGLNQMARM PYMNHSLSNH IPMNPSPAMN  180
PMYIANQMQN IQLREASNHF LHPDSGLAVA PQVAGPYAYT PQVAPKSQIP EVPDCTVAPI  240
SGPGQPPAPD GI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.18e-16bHLH family protein