PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.25
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 527aa    MW: 58775 Da    PI: 6.5469
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.25genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4032.9e-1231575261373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.25 157 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 245
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.25 246 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 336
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.25 337 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 428
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.25 429 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 519
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.25 520 LVVSSAW 526
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
CITLCRVNGK RYPPSKEEAV HRLENISLKG KHCNDLADKN ITTVKRLMRH YHRDKSGLQK  60
VPADEMITRA ILTDEQSDNF STIDSLGNCL TGHGQHDASV MQANILNDQG SLLAQPTPFH  120
NFLPVPADEM IPRASLTDEQ TEYFSTTDSL GINTGDLKQV IIACGKAAAG NGIYETEVLI  180
SELRQLVSIS GDPMQRLGAY MLQGLVARLS SSGSKLYKSL KCKEPTNSEL MSYMHHLCEM  240
CPSYKFGYMS ANGAIAEAIK GQNFVHIIDF QIAQGSQWIT IIQALAARPR GPPCLRITAI  300
DDSNSAYARG GGLDMVGTRL HSVSASCGMP FEFNAVHAVS HEVYLEHLDI RPGEVIVVNF  360
AYELHHSPDE SLSVENHRDR IIRMIKSLSP MVVTLVEQES NTNTTQFFPR YMETLDYYTA  420
MFESIDVALP RDAKIRVNTE QHCLGRDIIS LIACEGAERV ERHEVFGTWK ARFAMAGFRP  480
YPLSSVVNNT IKTLLDGYDS CYRLEERDGV LYLGWKNRVL VVSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-174GRAS family protein