PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.22
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 953aa    MW: 106807 Da    PI: 6.0875
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.22genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS400.81.4e-1225839521373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.22 583 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 671
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.22 672 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 762
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.22 763 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 854
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.22 855 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 945
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.22 946 LVVSSAW 952
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 953 aa     Download sequence    
PGVDEEQFQN EFKNLARLQH RNIVRLVGYC HHIEEVPAMY EGKLVLAEKI HRALCLEYMS  60
NGSLEKYISD ECDKYDWHTG YGIIKGICQG LKYLHTKLEP PIYHLDLKPA NILLDENMVP  120
RIADFGISRL FGDERTRATK STLGTQGYLP PEYIRNYLIS SKFDIFSLGV VIIKIMAGRA  180
GYYKSAEMSS HEFINVENWT NRPHETSSLM KAYSKQVKIC IEIGLSCVQE DRHKRPTVQN  240
IVDRLNETET ECTCVYKKFE VQENSGGLTP NYFMNNGRSV SEVPLNNDAG PSIQARTAWQ  300
YPTDMTAQQE LGERQAASLP NGIYEPPRQI MVGFPESGGT TTVERQDLAV KVQEAITDPF  360
VVKDHRSALN GKRYPPSKEE AVHRLENISL KGKHCNDLAD KNITTVKRLM RHYHRDKSGL  420
QKVPADEMIT RAILTDEQSD NFSTIDSLGN CLTGHGQHDA SVMQANILND QGSLLAQPTP  480
FHNFLPVPAD EMITRASLTD EQTEYFSTTD SLGNFLTGHG QPDASMTQTN ILNDLVSLSA  540
QPTPLHNFLS VPADEMIPRA SLTDEQTEYF STTDSLGINT GDLKQVIIAC GKAAAGNGIY  600
ETEVLISELR QLVSISGDPM QRLGAYMLQG LVARLSSSGS KLYKSLKCKE PTNSELMSYM  660
HHLCEMCPSY KFGYMSANGA IAEAIKGQNF VHIIDFQIAQ GSQWITIIQA LAARPRGPPC  720
LRITAIDDSN SAYARGGGLD MVGTRLHSVS ASCGMPFEFN AVHAVSHEVY LEHLDIRPGE  780
VIVVNFAYEL HHSPDESLSV ENHRDRIIRM IKSLSPMVVT LVEQESNTNT TQFFPRYMET  840
LDYYTAMFES IDVALPRDAK IRVNTEQHCL GRDIISLIAC EGAERVERHE VFGTWKARFA  900
MAGFRPYPLS SVVNNTIKTL LDGYDSCYRL EERDGVLYLG WKNRVLVVSS AWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-168GRAS family protein