PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 743aa MW: 85110.6 Da PI: 7.9095

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.7	2.2e-24	94	180	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.7 94 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 180 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
PASGRPAKIV SRQALAERRK RGDGGRFLAS DGPLPLERRS KRLEKQNLQN EKKPESKEYE 60 IVEAEQDPET EVVAGPGGEP KVGMVFLNED KAYEFYVSYA GTAGFNVRKG CSEKTANNVT 120 KSRAYVCSKE GFRPKSFTAE PKKQRAETRT GCEAHMTVKI TTSGKYVVTE CVADHNHDLE 180 APVVDIQILR SQKLLAKLQQ PPDPPKVVLI PNDYKNYVRT RHTTDMQLGD ARAISEYLQR 240 MKGENPSFFC SIQVDEDDQF RNVFWADVKS VMDFNYFGDV VCVDTRYSIS DYCRPLLLFI 300 GVNHHKQPTI FGTAFIYDES VESFKWLFET FKSAMSGKQP RTVLTDRSTA ISDAVASAWP 360 GTAHRFSLLH LYQNATKVLS DTFQGSETFA HDFSRSLYDY EEGDFLSSWE ILLAKYNLKD 420 NEWLSKLYED RERWALPYGR DIFCADIAAT LRSDNMDAIL TGVLKTEIDL PYFFSRYDKF 480 LEEKRLAEQE ADYLGVQMTQ RVPPLRLLWQ AANTYTPALF ELFRLEFELV LACMVYCCGE 540 IGPISEYEVT VKNRPQVHFV RFDSSEYMVL CSCKKFEFVG LPCCHALKVL EIKNIKELPP 600 QYILKRWRKD AQSESPKENF GFAAAGEDPK FTVSKRHNSL YRTLYKVAAK AAEDIEGQRF 660 MESQYDQLLE QVELLLQAKL HDKPSLSTIM RSQQPNLPQN DTSNSEPRRA SSKKNKNVEN 720 RRQQQSPLES SKKKKGRQGM FIT

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

PASGRPAKIV SRQALAERRK RGDGGRFLAS DGPLPLERRS KRLEKQNLQN EKKPESKEYE  60
IVEAEQDPET EVVAGPGGEP KVGMVFLNED KAYEFYVSYA GTAGFNVRKG CSEKTANNVT  120
KSRAYVCSKE GFRPKSFTAE PKKQRAETRT GCEAHMTVKI TTSGKYVVTE CVADHNHDLE  180
APVVDIQILR SQKLLAKLQQ PPDPPKVVLI PNDYKNYVRT RHTTDMQLGD ARAISEYLQR  240
MKGENPSFFC SIQVDEDDQF RNVFWADVKS VMDFNYFGDV VCVDTRYSIS DYCRPLLLFI  300
GVNHHKQPTI FGTAFIYDES VESFKWLFET FKSAMSGKQP RTVLTDRSTA ISDAVASAWP  360
GTAHRFSLLH LYQNATKVLS DTFQGSETFA HDFSRSLYDY EEGDFLSSWE ILLAKYNLKD  420
NEWLSKLYED RERWALPYGR DIFCADIAAT LRSDNMDAIL TGVLKTEIDL PYFFSRYDKF  480
LEEKRLAEQE ADYLGVQMTQ RVPPLRLLWQ AANTYTPALF ELFRLEFELV LACMVYCCGE  540
IGPISEYEVT VKNRPQVHFV RFDSSEYMVL CSCKKFEFVG LPCCHALKVL EIKNIKELPP  600
QYILKRWRKD AQSESPKENF GFAAAGEDPK FTVSKRHNSL YRTLYKVAAK AAEDIEGQRF  660
MESQYDQLLE QVELLLQAKL HDKPSLSTIM RSQQPNLPQN DTSNSEPRRA SSKKNKNVEN  720
RRQQQSPLES SKKKKGRQGM FIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.7