PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 1113aa MW: 124894 Da PI: 6.9192

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.9	5.6e-07	20	66	2	49
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49 fY Y++++GF+ r+ ++++s +g +++++f C + ++ ++ +k TRIDC5BG063970.3 20 FYYGYGERAGFKARTGSNRRSAGTGGMIMQRFLCCRGNYSYRKGNK-A 66 9*********************************998777666665.2 PP
2	FAR1	76.9	3.8e-24	340	426	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.3 340 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 426 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1113 aa Download sequence
ASSAPELGME FDSVHDAKGF YYGYGERAGF KARTGSNRRS AGTGGMIMQR FLCCRGNYSY 60 RKGNKAKDSD PAKEVEDGAA GGGGGEGKVE APKKRGRKPG KKSTPVIEVE NSVEKGVAIA 120 GAENGQAVPS TKNLGRGGDK KDVAEKDVES VIELEEEHVE VEDAAQDGAH DLGDGDDAGS 180 DAGEGVMEKE VEVKEKRGRG RPRKAVTEGN ALQACVSTDL GVTASQCAVD ERKKILNKYL 240 SKRQSRPASG RPAKIVSRQA LAERRKRGDG GRFLASDGPL PLERRSKRLE KQNLQNEKKP 300 ESKEYEIVEA EQDPETEVVA GPGGEPKVGM VFLNEDKAYE FYVSYAGTAG FNVRKGCSEK 360 TANNVTKSRA YVCSKEGFRP KSFTAEPKKQ RAETRTGCEA HMTVKITTSG KYVVTECVAD 420 HNHDLEAPVV DIQILRSQKL LAKLQQPPDP PKVVLIPNDY KNYVRTRHTT DMQLGDARAI 480 SEYLQRMKGE NPSFFCSIQV DEDDQFRNVF WADVKSVMDF NYFGDVVCVD TRYSISDYCR 540 PLLLFIGVNH HKQPTIFGTA FIYDESVESF KWLFETFKSA MSGKQPRTVL TDRSTAISDA 600 VASAWPGTAH RFSLLHLYQN ATKVLSDTFQ GSETFAHDFS RSLYDYEEGD FLSSWEILLA 660 KYNLKDNEWL SKLYEDRERW ALPYGRDIFC ADIAATLRSD NMDAILTGVL KTEIDLPYFF 720 SRYDKFLEEK RLAEQEADYL GVQMTQRVPP LRLLWQAANT YTPALFELFR LEFELVLACM 780 VYCCGEIGPI SEYEVTVKNR PQVHFVRFDS SEYMVLCSCK KFEFVGLPCC HALKVLEIKN 840 IKELPPQYIL KRWRKDAQSE SPKENFGFAA AGEDPKFTVS KRHNSLYRTL YKVAAKAAED 900 IEGQRFMESQ YDQLLEQVEL LLQAKLHDKP SLSTIMRSQQ PNLPQNDTSN SEPRRASSKK 960 NKNVENRRQQ QSPLESSKKK KGRQGLVEPE EAELPLRVLA PTISNDIPNH MSTPTNQFLA 1020 PSHLMQAPYV TQQFGLNSLQ GFSGMSPFGQ MQEQSPVHLQ QPHLQQPPFH SGPQMHQAPP 1080 PDIQSLQFLS SNPQLGHQTT DQGQYTIPVW DFL

Sequence ? help Back to Top

Protein Sequence Length: 1113 aa Download sequence

ASSAPELGME FDSVHDAKGF YYGYGERAGF KARTGSNRRS AGTGGMIMQR FLCCRGNYSY  60
RKGNKAKDSD PAKEVEDGAA GGGGGEGKVE APKKRGRKPG KKSTPVIEVE NSVEKGVAIA  120
GAENGQAVPS TKNLGRGGDK KDVAEKDVES VIELEEEHVE VEDAAQDGAH DLGDGDDAGS  180
DAGEGVMEKE VEVKEKRGRG RPRKAVTEGN ALQACVSTDL GVTASQCAVD ERKKILNKYL  240
SKRQSRPASG RPAKIVSRQA LAERRKRGDG GRFLASDGPL PLERRSKRLE KQNLQNEKKP  300
ESKEYEIVEA EQDPETEVVA GPGGEPKVGM VFLNEDKAYE FYVSYAGTAG FNVRKGCSEK  360
TANNVTKSRA YVCSKEGFRP KSFTAEPKKQ RAETRTGCEA HMTVKITTSG KYVVTECVAD  420
HNHDLEAPVV DIQILRSQKL LAKLQQPPDP PKVVLIPNDY KNYVRTRHTT DMQLGDARAI  480
SEYLQRMKGE NPSFFCSIQV DEDDQFRNVF WADVKSVMDF NYFGDVVCVD TRYSISDYCR  540
PLLLFIGVNH HKQPTIFGTA FIYDESVESF KWLFETFKSA MSGKQPRTVL TDRSTAISDA  600
VASAWPGTAH RFSLLHLYQN ATKVLSDTFQ GSETFAHDFS RSLYDYEEGD FLSSWEILLA  660
KYNLKDNEWL SKLYEDRERW ALPYGRDIFC ADIAATLRSD NMDAILTGVL KTEIDLPYFF  720
SRYDKFLEEK RLAEQEADYL GVQMTQRVPP LRLLWQAANT YTPALFELFR LEFELVLACM  780
VYCCGEIGPI SEYEVTVKNR PQVHFVRFDS SEYMVLCSCK KFEFVGLPCC HALKVLEIKN  840
IKELPPQYIL KRWRKDAQSE SPKENFGFAA AGEDPKFTVS KRHNSLYRTL YKVAAKAAED  900
IEGQRFMESQ YDQLLEQVEL LLQAKLHDKP SLSTIMRSQQ PNLPQNDTSN SEPRRASSKK  960
NKNVENRRQQ QSPLESSKKK KGRQGLVEPE EAELPLRVLA PTISNDIPNH MSTPTNQFLA  1020
PSHLMQAPYV TQQFGLNSLQ GFSGMSPFGQ MQEQSPVHLQ QPHLQQPPFH SGPQMHQAPP  1080
PDIQSLQFLS SNPQLGHQTT DQGQYTIPVW DFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	204	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-102	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.3