PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 694aa MW: 79632.3 Da PI: 6.5767

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.8	2e-24	45	131	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.11 45 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 131 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
PFVQPESKEY EIVEAEQDPE TEVVAGPGGE PKVGMVFLNE DKAYEFYVSY AGTAGFNVRK 60 GCSEKTANNV TKSRAYVCSK EGFRPKSFTA EPKKQRAETR TGCEAHMTVK ITTSGKYVVT 120 ECVADHNHDL EAPVVDIQIL RSQKLLAKLQ QPPDPPKVVL IPNDYKNYVR TRHTTDMQLG 180 DARAISEYLQ RMKGENPSFF CSIQVDEDDQ FRNVFWADVK SVMDFNYFGD VVCVDTRYSI 240 SDYCRPLLLF IGVNHHKQPT IFGTAFIYDE SVESFKWLFE TFKSAMSGKQ PRTVLTDRST 300 AISDAVASAW PGTAHRFSLL HLYQNATKVL SDTFQGSETF AHDFSRSLYD YEEGDFLSSW 360 EILLAKYNLK DNEWLSKLYE DRERWALPYG RDIFCADIAA TLRSDNMDAI LTGVLKTEID 420 LPYFFSRYDK FLEEKRLAEQ EADYLGVQMT QRVPPLRLLW QAANTYTPAL FELFRLEFEL 480 VLACMVYCCG EIGPISEYEV TVKNRPQVHF VRFDSSEYMV LCSCKKFEFV GLPCCHALKV 540 LEIKNIKELP PQYILKRWRK DAQSESPKEN FGFAAAGEDP KFTVSKRHNS LYRTLYKVAA 600 KAAEDIEGQR FMESQYDQLL EQVELLLQAK LHDKPSLSTI MRSQQPNLPQ NDTSNSEPRR 660 ASSKKNKNVE NRRQQQSPLE SSKKKKGRQG MFIT

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

PFVQPESKEY EIVEAEQDPE TEVVAGPGGE PKVGMVFLNE DKAYEFYVSY AGTAGFNVRK  60
GCSEKTANNV TKSRAYVCSK EGFRPKSFTA EPKKQRAETR TGCEAHMTVK ITTSGKYVVT  120
ECVADHNHDL EAPVVDIQIL RSQKLLAKLQ QPPDPPKVVL IPNDYKNYVR TRHTTDMQLG  180
DARAISEYLQ RMKGENPSFF CSIQVDEDDQ FRNVFWADVK SVMDFNYFGD VVCVDTRYSI  240
SDYCRPLLLF IGVNHHKQPT IFGTAFIYDE SVESFKWLFE TFKSAMSGKQ PRTVLTDRST  300
AISDAVASAW PGTAHRFSLL HLYQNATKVL SDTFQGSETF AHDFSRSLYD YEEGDFLSSW  360
EILLAKYNLK DNEWLSKLYE DRERWALPYG RDIFCADIAA TLRSDNMDAI LTGVLKTEID  420
LPYFFSRYDK FLEEKRLAEQ EADYLGVQMT QRVPPLRLLW QAANTYTPAL FELFRLEFEL  480
VLACMVYCCG EIGPISEYEV TVKNRPQVHF VRFDSSEYMV LCSCKKFEFV GLPCCHALKV  540
LEIKNIKELP PQYILKRWRK DAQSESPKEN FGFAAAGEDP KFTVSKRHNS LYRTLYKVAA  600
KAAEDIEGQR FMESQYDQLL EQVELLLQAK LHDKPSLSTI MRSQQPNLPQ NDTSNSEPRR  660
ASSKKNKNVE NRRQQQSPLE SSKKKKGRQG MFIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.11