PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG063600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 541aa    MW: 60027.8 Da    PI: 5.9174
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG063600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS426.42.3e-1301715401373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++++++c +av+++d+ +++ l+++l +l+s +gdpmqRl ay++e+L arl+ s+s+lyk+l+++e +   sse +++++l+ e++P++kf
  TRIDC5BG063600.2 171 LKQVIIACGKAVAANDMYATELLISELGQLVSVSGDPMQRLGAYMLEGLVARLSFSGSKLYKSLKCKEPT---SSELMSYMHLLCEICPFYKF 260
                       57899****************************************************************9...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI ea++ge+ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiTg+++++s   +   l  +g rL+++ +++g+pfefn+ v+ 
  TRIDC5BG063600.2 261 GYMSANGAIAEAIKGENFVHIIDFQIAQGSQWITIIQALAARPGGPPFLRITGIDDSNSAyaRGGGLDMVGTRLHSVSASCGLPFEFNA-VHA 352
                       ********************************************************988899999************************.688 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       + +++ +++L+++pgEa++Vn+++qlh+++desvs+e++rd++++++kslsP+vv++veqe+++n++ Fl r le+l+yy+a+f+s+++ lpr
  TRIDC5BG063600.2 353 ASHEVYIQHLDIRPGEAIVVNFAYQLHHTPDESVSMENHRDRIVRMIKSLSPRVVTLVEQESNTNTSAFLPRYLETLDYYTAMFESIDVALPR 445
                       999999*************************************************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +++ ri+ E+++++r+ivn++acegaer+erhe ++kW++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r Lv+ 
  TRIDC5BG063600.2 446 DDKRRISTEQHCVARDIVNLIACEGAERVERHEVFGKWKARFAMAGFRPYPLSSVVNNTIKTLLDSYHSC-YRLEERDGVLYLGWKSRVLVVS 537
                       ********************************************************************55.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC5BG063600.2 538 SAW 540
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MSAKASERTY RCSDDSQMAY YNNSVPLAEN GRFYMMQNHL DVHYTSSGDG SQKISSNPQV  60
FEAQYCTLES SLADGVYPTQ SSTSSHSISP ISGSPLSQND SHSYHTYDSP PTASCVTEIP  120
DFQSKLKELE NAILGPELDI ASDSPESLLQ ANHPLKQDNW RQLLGINTGD LKQVIIACGK  180
AVAANDMYAT ELLISELGQL VSVSGDPMQR LGAYMLEGLV ARLSFSGSKL YKSLKCKEPT  240
SSELMSYMHL LCEICPFYKF GYMSANGAIA EAIKGENFVH IIDFQIAQGS QWITIIQALA  300
ARPGGPPFLR ITGIDDSNSA YARGGGLDMV GTRLHSVSAS CGLPFEFNAV HAASHEVYIQ  360
HLDIRPGEAI VVNFAYQLHH TPDESVSMEN HRDRIVRMIK SLSPRVVTLV EQESNTNTSA  420
FLPRYLETLD YYTAMFESID VALPRDDKRR ISTEQHCVAR DIVNLIACEG AERVERHEVF  480
GKWKARFAMA GFRPYPLSSV VNNTIKTLLD SYHSCYRLEE RDGVLYLGWK SRVLVVSSAW  540
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein