PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063070.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 393aa MW: 42298.7 Da PI: 8.6969

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063070.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.8	2.3e-12	118	174	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g TRIDC5BG063070.3 118 SKYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDMEEKAARAYDLAALKYWG 174 89*****************433.44555535555.77****************98 PP
2	AP2	40.9	5.2e-13	219	268	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I +s +k +lg+f + +Aa+a++ a+ k++g TRIDC5BG063070.3 219 YRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 268 9*************999754...5******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
LLDEQAAATS AAMEAAGWMA RAGDVYEVDG GNGEDGGGAI VTAGHDNPGG YVHPLTLSMS 60 SGSQSSCVTM QQAAAQAHAY VGQATAASKK RGAGAGAGQN KQPVVHRKCI DTFGQRTSKY 120 RGVTRHRWTG RYEAHLWDNS CRKEGQTRKG RQGGYDMEEK AARAYDLAAL KYWGASTHIN 180 FPVEDYQEEL EVMKNMTRQE YVAHLRRKSS GFSRGASMYR GVTRHHQQGR WQARIGRVSG 240 NKDLYLGTFS AEADAAEAYD VAAIKFRGLN AVTNFDINRY DVDKIMESST LLPGDQVRRR 300 KDGPDDSAAV VASAAAALVQ AGSATDYWRQ PAAVTTDEHS RHHLGLLSSE SFSLLRGVVS 360 VDGDAAVAQQ GQGNRMSGAS SLATSLSNSR EQS

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

LLDEQAAATS AAMEAAGWMA RAGDVYEVDG GNGEDGGGAI VTAGHDNPGG YVHPLTLSMS  60
SGSQSSCVTM QQAAAQAHAY VGQATAASKK RGAGAGAGQN KQPVVHRKCI DTFGQRTSKY  120
RGVTRHRWTG RYEAHLWDNS CRKEGQTRKG RQGGYDMEEK AARAYDLAAL KYWGASTHIN  180
FPVEDYQEEL EVMKNMTRQE YVAHLRRKSS GFSRGASMYR GVTRHHQQGR WQARIGRVSG  240
NKDLYLGTFS AEADAAEAYD VAAIKFRGLN AVTNFDINRY DVDKIMESST LLPGDQVRRR  300
KDGPDDSAAV VASAAAALVQ AGSATDYWRQ PAAVTTDEHS RHHLGLLSSE SFSLLRGVVS  360
VDGDAAVAQQ GQGNRMSGAS SLATSLSNSR EQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-108	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063070.3