PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG063070.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 330aa    MW: 35567.4 Da    PI: 8.9481
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG063070.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.21.8e-12123179155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++gr++A+++d  + ++  ++ k  + g ++ +e+Aa+a++ a++k++g
  TRIDC5BG063070.2 123 SKYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDMEEKAARAYDLAALKYWG 179
                       89*******************433.44555535555.77******************98 PP
2AP241.24e-13224273355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GV++++++grW A+I  +s    +k  +lg+f  + +Aa+a++ a+ k++g
  TRIDC5BG063070.2 224 YRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 273
                       9***************999754...5**********99************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
DAHAALLDEQ AAATSAAMEA AGWMARAGDV YEVDGGNGED GGGAIVTAGH DNPGGYVHPL  60
TLSMSSGSQS SCVTMQQAAA QAHAYVGQAT AASKKRGAGA GAGQNKQPVV HRKCIDTFGQ  120
RTSKYRGVTR HRWTGRYEAH LWDNSCRKEG QTRKGRQGGY DMEEKAARAY DLAALKYWGA  180
STHINFPVED YQEELEVMKN MTRQEYVAHL RRKSSGFSRG ASMYRGVTRH HQQGRWQARI  240
GRVSGNKDLY LGTFSAEADA AEAYDVAAIK FRGLNAVTNF DINRYDVDKI MESSTLLPGD  300
QVRRRKDGPD DSAAVVASAA AALVQAGSAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-109AP2 family protein