PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG061180.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 173aa MW: 20111.3 Da PI: 9.9457 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.6 | 1.4e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+++fs+ g+ly +ss TRIDC5BG061180.5 10 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALVLFSHAGRLYQFSS 59 9***********************************************96 PP | |||||||
2 | K-box | 87.9 | 1.9e-29 | 84 | 172 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++++ + e+ Lk+++e Lq++qR+llGedL +Ls eL qLe+q+ k l++iRs+K+++ll+++ +l++ke+ l+++n++L++k+ TRIDC5BG061180.5 84 TRDEMQNNYLEYMELKARVEVLQHSQRNLLGEDLAPLSTTELDQLESQVGKTLRQIRSRKTQVLLDEMCDLKRKEQILEDANMTLKRKV 172 56789**********************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MGRGKVVLQR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALVLFSH AGRLYQFSSS 60 SNMLKTLERY QRYIFASQDA VVPTRDEMQN NYLEYMELKA RVEVLQHSQR NLLGEDLAPL 120 STTELDQLES QVGKTLRQIR SRKTQVLLDE MCDLKRKEQI LEDANMTLKR KVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 5e-71 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG061180.5 |