PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG061020.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 471aa MW: 53248.4 Da PI: 6.8429

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG061020.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.1	3.4e-12	12	52	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +a+++g +++ qc++++ TRIDC5BG061020.4 12 WNADEEILLLEGIEMYGLGNWAEVAEHVG-TKSKAQCIEHYT 52 ***************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
DNLSFPLICP DWNADEEILL LEGIEMYGLG NWAEVAEHVG TKSKAQCIEH YTTAYMNSPC 60 YPLPDMSHVN GKNRKELLAM AKVQGESKKG IPLLSGDLTP KAESPFSPSR VKMEDALGEG 120 PASRSPSHIP GGANKKASTV GHFKDSANLS KVEDGHMDRS IGVKKPRYSA DEGPSLTELS 180 GYNAKRHEFD PEYDNDAEQA LAEMEFKETD SETDRELKLR VLRIYLSRLD ERKRRKEFIL 240 ERNLLYPNPL EKDLTNEDKE VYHRYKVFMR FLSKEEHEAL VRSVIEERKI RRRIQELQEC 300 RSAGCRTLAE AKIHIEQKRR KEYEANALKA KESGQLISNS KSGHKTNRPM KVETDGSLDL 360 KKGSAILDAG GRDSPKSTGP TSAKQWDDWD IVGLPGAELL SASEKLLCCQ NRLLPSHYLR 420 MQEVLMQEMF KGNVVKKEDA HVLFKVDPTK VDTVYDMVTK KLGNNEEAPM V

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

DNLSFPLICP DWNADEEILL LEGIEMYGLG NWAEVAEHVG TKSKAQCIEH YTTAYMNSPC  60
YPLPDMSHVN GKNRKELLAM AKVQGESKKG IPLLSGDLTP KAESPFSPSR VKMEDALGEG  120
PASRSPSHIP GGANKKASTV GHFKDSANLS KVEDGHMDRS IGVKKPRYSA DEGPSLTELS  180
GYNAKRHEFD PEYDNDAEQA LAEMEFKETD SETDRELKLR VLRIYLSRLD ERKRRKEFIL  240
ERNLLYPNPL EKDLTNEDKE VYHRYKVFMR FLSKEEHEAL VRSVIEERKI RRRIQELQEC  300
RSAGCRTLAE AKIHIEQKRR KEYEANALKA KESGQLISNS KSGHKTNRPM KVETDGSLDL  360
KKGSAILDAG GRDSPKSTGP TSAKQWDDWD IVGLPGAELL SASEKLLCCQ NRLLPSHYLR  420
MQEVLMQEMF KGNVVKKEDA HVLFKVDPTK VDTVYDMVTK KLGNNEEAPM V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	237	RKRRKE

Link Out ? help Back to Top
Ensembl	TRIDC5BG061020.4