PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG061020.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 599aa MW: 66999.9 Da PI: 8.2356

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG061020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.7	4.7e-12	140	180	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +a+++g +++ qc++++ TRIDC5BG061020.1 140 WNADEEILLLEGIEMYGLGNWAEVAEHVG-TKSKAQCIEHYT 180 ***************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
SARCGRPRRG SGSPLELGLG FRGVCARVWS AMGRSRGVPN SGDDDTNHRS KRRRVASTGD 60 ASDSLSAACG GAGDGKKALY HCNYCNKDLS GKIRFKCSKC PDFDLCVECF SVGAEVTPHR 120 SNHPYRVMDN LSFPLICPDW NADEEILLLE GIEMYGLGNW AEVAEHVGTK SKAQCIEHYT 180 TAYMNSPCYP LPDMSHVNGK NRKELLAMAK VQGESKKGIP LLSGDLTPKA ESPFSPSRVK 240 MEDALGEGPA SRSPSHIPGG ANKKASTVGH FKDSANLSKV EDGHMDRSIG VKKPRYSADE 300 GPSLTELSGY NAKRHEFDPE YDNDAEQALA EMEFKETDSE TDRELKLRVL RIYLSRLDER 360 KRRKEFILER NLLYPNPLEK DLTNEDKEVY HRYKVFMRFL SKEEHEALVR SVIEERKIRR 420 RIQELQECRS AGCRTLAEAK IHIEQKRRKE YEANALKAKE SGQLISNSKS GHKTNRPMKV 480 ETDGSLDLKK GSAILDAGGR DSPKSTGPTS AKQWDDWDIV GLPGAELLSA SEKLLCCQNR 540 LLPSHYLRMQ EVLMQEMFKG NVVKKEDAHV LFKVDPTKVD TVYDMVTKKL GNNEEAPMV

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

SARCGRPRRG SGSPLELGLG FRGVCARVWS AMGRSRGVPN SGDDDTNHRS KRRRVASTGD  60
ASDSLSAACG GAGDGKKALY HCNYCNKDLS GKIRFKCSKC PDFDLCVECF SVGAEVTPHR  120
SNHPYRVMDN LSFPLICPDW NADEEILLLE GIEMYGLGNW AEVAEHVGTK SKAQCIEHYT  180
TAYMNSPCYP LPDMSHVNGK NRKELLAMAK VQGESKKGIP LLSGDLTPKA ESPFSPSRVK  240
MEDALGEGPA SRSPSHIPGG ANKKASTVGH FKDSANLSKV EDGHMDRSIG VKKPRYSADE  300
GPSLTELSGY NAKRHEFDPE YDNDAEQALA EMEFKETDSE TDRELKLRVL RIYLSRLDER  360
KRRKEFILER NLLYPNPLEK DLTNEDKEVY HRYKVFMRFL SKEEHEALVR SVIEERKIRR  420
RIQELQECRS AGCRTLAEAK IHIEQKRRKE YEANALKAKE SGQLISNSKS GHKTNRPMKV  480
ETDGSLDLKK GSAILDAGGR DSPKSTGPTS AKQWDDWDIV GLPGAELLSA SEKLLCCQNR  540
LLPSHYLRMQ EVLMQEMFKG NVVKKEDAHV LFKVDPTKVD TVYDMVTKKL GNNEEAPMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	55	KRRRV
2	360	365	RKRRKE

Link Out ? help Back to Top
Ensembl	TRIDC5BG061020.1