PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG060470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 21071.2 Da PI: 5.6482 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.1 | 6.7e-16 | 17 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ g+Wv+eIr+p+ + +r++lg+f tae+Aa a++ a+ +l+g TRIDC5BG060470.1 17 FYRGIR--SRYGKWVSEIREPR----KaRRIWLGTFPTAEMAAVAYDVAAHALRG 65 69***5..779*********94....36************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
LADQSMSGHG SSGRHPFYRG IRSRYGKWVS EIREPRKARR IWLGTFPTAE MAAVAYDVAA 60 HALRGVDAEL NFPGLAATRP APASTSADGI RAAAAAAAAS IGHGRAGGGI APGDAGSALQ 120 QQLGGTGRSA DAASASGTAQ QDQAGIGFNQ YFLDEEALFE TPQFLRNMAA GMMMSPPRLS 180 ADSSDESPDA SEAGESLWSY RDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 8e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG060470.1 |