PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG058860.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 835aa    MW: 90996.7 Da    PI: 6.3324
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG058860.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.73.9e-181067457
                      -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                        ++t+eq+++Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  TRIDC5BG058860.4 10 YVRYTPEQVDALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 67
                      6789****************************************************97 PP

2START174.95.1e-551583652204
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++ +++l+ i +g  g+++
  TRIDC5BG058860.4 158 IAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDVLQIIPTGngGTIE 249
                       68999*****************************************************.8888888888************************ PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l++++++a+++l++ Rdf+++Ry+  l++g++vi+++S+++ +  p+   ++++vRae+lpSg+li+p+++g+s +++v+hvdl++++++++l
  TRIDC5BG058860.4 250 LIYMQTYAPTTLAApRDFWILRYTSGLEDGSLVICERSLTQATGGPSgpnTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVL 342
                       ************999*****************************999999******************************************* PP

                       HHHHHHHHHHHHHHHHHHTXXXX CS
             START 182 rslvksglaegaktwvatlqrqc 204
                       r+l++s  + ++k++ a+l++ +
  TRIDC5BG058860.4 343 RPLYESPKILAQKMTIAALRHIR 365
                       ******************99865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    
GAPQVDTGKY VRYTPEQVDA LERVYSECPK PSSLRRQQLI RECPILSNIE PKQIKVWFQN  60
RRCREKQRKE ASRLQTVNRK LSAMNKLLME ENDRLQKQVS RLVYENGYMR THLNNPSVAT  120
TDTSCESVVT SGQHQQQQNA VVPRPQRDAN NPAGLLAIAE ETLAEFLSKA TGTAVDWVQM  180
VGMKPGPDSI GIIAVSHNCS GVAARACGLV SLEPTKVAEI LKDRPSWYRD CRCVDVLQII  240
PTGNGGTIEL IYMQTYAPTT LAAPRDFWIL RYTSGLEDGS LVICERSLTQ ATGGPSGPNT  300
PNFVRAEVLP SGYLIRPCEG GGSMIHIVDH VDLDAWSVPE VLRPLYESPK ILAQKMTIAA  360
LRHIRQIAHE SSGEMPYGGG RQPAVLRTFS QRLSRGFNDA VNGFLDDGWS LMSSDGAEDV  420
TIAINSSPNK LAVSHVNPSQ MSTAIGGGVL CAKASMLLQN VPPALLVRFL REHRSEWADP  480
GVDAYSAAAL RASPYAVPGL RASGFMGSQV ILPLAHTLEH EEFLEVIRLE GHSLCHDEVV  540
LSRDMYLLQL CSGVDENAAG ACAQLVFAPI DESFADDAPL LPSGFRVIPL DAKTDAPSAT  600
RTLDLASTLE VGPGGTRAPS DASSTSNTRS VLTIAFQFSY ENHLRESVAA MARQYVRTVV  660
ASVQRVAMAI APSRPGGQLE MKNPPGSPEA HTLARWIGRS YRFHTGAELL CTESQSADAS  720
LKALWQHSDS IMCCSLKAAP VFTFANQAGL DMLETTLIAL QDISLEKILD DDGRKALCSE  780
FPKIMQQGFA YLPGGVCVSS MGRPVSYEQA VAWKVLGDDD APHCLAFMFV NWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein