PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG058860.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 798aa    MW: 86418 Da    PI: 6.977
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG058860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.83.7e-183794457
                      -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                        ++t+eq+++Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  TRIDC5BG058860.1 37 YVRYTPEQVDALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 94
                      6789****************************************************97 PP

2START1754.7e-551853922204
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++ +++l+ i +g  g+++
  TRIDC5BG058860.1 185 IAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDVLQIIPTGngGTIE 276
                       68999*****************************************************.8888888888************************ PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l++++++a+++l++ Rdf+++Ry+  l++g++vi+++S+++ +  p+   ++++vRae+lpSg+li+p+++g+s +++v+hvdl++++++++l
  TRIDC5BG058860.1 277 LIYMQTYAPTTLAApRDFWILRYTSGLEDGSLVICERSLTQATGGPSgpnTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVL 369
                       ************999*****************************999999******************************************* PP

                       HHHHHHHHHHHHHHHHHHTXXXX CS
             START 182 rslvksglaegaktwvatlqrqc 204
                       r+l++s  + ++k++ a+l++ +
  TRIDC5BG058860.1 370 RPLYESPKILAQKMTIAALRHIR 392
                       ******************99865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 798 aa     Download sequence    
MAGAMVVHGH GGGGRDRDRD RSSPGGSGAP QVDTGKYVRY TPEQVDALER VYSECPKPSS  60
LRRQQLIREC PILSNIEPKQ IKVWFQNRRC REKQRKEASR LQTVNRKLSA MNKLLMEEND  120
RLQKQVSRLV YENGYMRTHL NNPSVATTDT SCESVVTSGQ HQQQQNAVVP RPQRDANNPA  180
GLLAIAEETL AEFLSKATGT AVDWVQMVGM KPGPDSIGII AVSHNCSGVA ARACGLVSLE  240
PTKVAEILKD RPSWYRDCRC VDVLQIIPTG NGGTIELIYM QTYAPTTLAA PRDFWILRYT  300
SGLEDGSLVI CERSLTQATG GPSGPNTPNF VRAEVLPSGY LIRPCEGGGS MIHIVDHVDL  360
DAWSVPEVLR PLYESPKILA QKMTIAALRH IRQIAHESSG EMPYGGGRQP AVLRTFSQRL  420
SRGFNDAVNG FLDDGWSLMS SDGAEDVTIA INSSPNKLAV SHVNPSQMST AIGGGVLCAK  480
ASMLLQNVPP ALLVRFLREH RSEWADPGVD AYSAAALRAS PYAVPGLRAS GFMGSQVILP  540
LAHTLEHEEF LEVIRLEGHS LCHDEVVLSR DMYLLQLCSG VDENAAGACA QLVFAPIDES  600
FADDAPLLPS GFRVIPLDAK TDAPSATRTL DLASTLEVGP GGTRAPSDAS STSNTRSVLT  660
IAFQFSYENH LRESVAAMAR QYVRTVVASV QRVAMAIAPS RPGGQLEMKN PPGSPEAHTL  720
ARWIGRSYRF HTGAELLCTE SQSADASLKA LWQHSDSIMC CSLKVGCCSG VHLRQPGRAG  780
HAGDDADRAP GHLAREDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein