PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG058760.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 300aa    MW: 33300.4 Da    PI: 4.6995
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG058760.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.3e-08555146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                      +++WT eE+  l  +++++G g+W++I +          R+  ++k++w++
  TRIDC5BG058760.1  5 KQKWTLEEEAALRAGIARYGVGSWRLILKDKDfssilSCRSNVDLKDKWRN 55
                      79*******************************9**9889*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGARKQKWTL EEEAALRAGI ARYGVGSWRL ILKDKDFSSI LSCRSNVDLK DKWRNINVFF  60
TESGSMDKGR TATKKNRAAP RRNDHPMANS IVASDVDDEI VDEQPIASMS SELWNVSIPK  120
KSRSRLNNII LESVKNLNEP TGSHSTTIAK YIEEEYWPPS EFDRILSANL KDLTTSGELI  180
EVNRKYRIAP APGSMYSEGR SPETLLLEDM QREPQKIESD EIKTPTKSQV DFELADMITM  240
TAEEAASAAA RAIAEAEALM AEAEAATREA EAAEADAQAA QAFAEAVRNR NVTELIMAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-54MYB_related family protein