PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG058290.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 187aa MW: 21377.6 Da PI: 9.7409 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 192.2 | 2.4e-59 | 23 | 162 | 21 | 170 |
YABBY 21 ilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl.senedeevprv 112 l vsvPs+s++++vtvrCGhCtsllsvnl+ q ++++h +e+ k ++ +++ n+ + ++s+++ +++ +++++e++ ++ TRIDC5BG058290.5 23 PLQVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRMPMMFsTKSDQEHMLHM 107 589**************************************9........7899999*********999999888877677345566677776 PP YABBY 113 ppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 p PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl TRIDC5BG058290.5 108 RP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 162 55...6**************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MFLPFCLSCF AVWFQLVIFF SCPLQVSVPS NSMLNIVTVR CGHCTSLLSV NLRGLIQSPP 60 VQDHSQENFK AHNISFRGNY PDYGTSSKYR MPMMFSTKSD QEHMLHMRPA PEKRQRVPSA 120 YNRFIKEEIR RIKTNNPDIS HREAFSTAAK NWAHFPNIHF GLGSNESSKK LDEAIAAPIP 180 QKVQGLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 5e-52 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG058290.5 |