PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG058290.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 96aa MW: 11132.7 Da PI: 10.4695

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG058290.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	132.7	4.5e-41	7	71	102	170
YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++++e++ + +rPPekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl TRIDC5BG058290.3 7 TKSDQEHMLH----MRPPEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 71 3445555665....8****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 96 aa Download sequence
MPMMFSTKSD QEHMLHMRPP EKRQRVPSAY NRFIKEEIRR IKTNNPDISH REAFSTAAKN 60 WAHFPNIHFG LGSNESSKKL DEAIAAPIPQ KVQGLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	4e-37	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG058290.3