PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG058290.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 155aa MW: 17843.3 Da PI: 9.7896

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG058290.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	26.5	2e-08	16	36	5	25
YABBY 5 ssseqvCyvqCnfCntilavs 25 +e+vCyv+CnfCntila + TRIDC5BG058290.2 16 APPEHVCYVHCNFCNTILAEN 36 679***************966 PP
2	YABBY	131.9	8.3e-41	34	130	72	170
YABBY 72 leelkveeenlksnvekeesastsvssekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +e+ k ++ +++ n+ + ++s+++ +++ +++++e++ ++ p PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahf TRIDC5BG058290.2 34 AENFKAHNISFRGNYPDYGTSSKYRMPMMFsTKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHF 123 57888899999999999988888777666634556667777655...6******************************************* PP YABBY 164 Pkihfgl 170 P+ihfgl TRIDC5BG058290.2 124 PNIHFGL 130 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
RYLATSAREI MSAQIAPPEH VCYVHCNFCN TILAENFKAH NISFRGNYPD YGTSSKYRMP 60 MMFSTKSDQE HMLHMRPAPE KRQRVPSAYN RFIKEEIRRI KTNNPDISHR EAFSTAAKNW 120 AHFPNIHFGL GSNESSKKLD EAIAAPIPQK VQGLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	1e-41	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG058290.2