PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG058290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 154aa MW: 17772.2 Da PI: 9.7896 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 26.6 | 1.8e-08 | 16 | 36 | 5 | 25 |
YABBY 5 ssseqvCyvqCnfCntilavs 25 +e+vCyv+CnfCntila + TRIDC5BG058290.1 16 APPEHVCYVHCNFCNTILAEN 36 679***************976 PP | |||||||
2 | YABBY | 136.4 | 3.5e-42 | 34 | 129 | 72 | 170 |
YABBY 72 leelkveeenlksnvekeesastsvsseklsened.eevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +e+ k ++ +++ n+ + ++s+++ +++s+++d e++ + +rPPekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahf TRIDC5BG058290.1 34 AENFKAHNISFRGNYPDYGTSSKYRMPMMFSTKSDqEHMLH----MRPPEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHF 122 57888899999999999988888877767766555055554....8*********************************************** PP YABBY 164 Pkihfgl 170 P+ihfgl TRIDC5BG058290.1 123 PNIHFGL 129 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
RYLATSAREI MSAQIAPPEH VCYVHCNFCN TILAENFKAH NISFRGNYPD YGTSSKYRMP 60 MMFSTKSDQE HMLHMRPPEK RQRVPSAYNR FIKEEIRRIK TNNPDISHRE AFSTAAKNWA 120 HFPNIHFGLG SNESSKKLDE AIAAPIPQKV QGLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-43 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG058290.1 |