PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG057240.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 413aa MW: 45549.5 Da PI: 6.3211

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG057240.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.1	5.6e-12	52	129	17	99
E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++p + ++ +++ + s ++le+++gr+++vk+ k g+++lt+GW++Fv+an+++e+ ++F + g+s+f +v++f++ TRIDC5BG057240.5 52 CIPWEVSSKLrDMI-PDSEPIKLETPDGRTYSVKF---VKFGQITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--NVHIFNS 129 55555555555223.34557*************...6667899**********************999999..9999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
RPMQFLLFAS DDKDQLVTDN QPLLLLLLLP SIRFPLYMTF RRHGSNLSVF LCIPWEVSSK 60 LRDMIPDSEP IKLETPDGRT YSVKFVKFGQ ITLTTGWRGF VDANHIEENN PMLFVYRGNS 120 TFNVHIFNSS GHDKSLPCSQ PPCDHHVLNE QVVPHPGHVD SSAHFGYTML PGSSVTKAQD 180 DKLLEWAHTI KSGFPLFVAA MDESNVSLND CHVYIPLSLV GQFKEEVVKI VAPDGSEYGV 240 GAKKHNDDQI VLQSGWDKFV ASQCIQQNDL LIFIIEGEAR LKVLVLDPSG SEKTFAMGNS 300 SNAQEKQPLP PTVTNLSSED NEVTDLSSAY DEVVGKDTTT SRREQRPLRS CRVEAEKMGS 360 TSCPSTKSGH KAGNSNEAGI EAPMPNKSYI VPKSGRSARA FGLGSRSLQL GPS

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

RPMQFLLFAS DDKDQLVTDN QPLLLLLLLP SIRFPLYMTF RRHGSNLSVF LCIPWEVSSK  60
LRDMIPDSEP IKLETPDGRT YSVKFVKFGQ ITLTTGWRGF VDANHIEENN PMLFVYRGNS  120
TFNVHIFNSS GHDKSLPCSQ PPCDHHVLNE QVVPHPGHVD SSAHFGYTML PGSSVTKAQD  180
DKLLEWAHTI KSGFPLFVAA MDESNVSLND CHVYIPLSLV GQFKEEVVKI VAPDGSEYGV  240
GAKKHNDDQI VLQSGWDKFV ASQCIQQNDL LIFIIEGEAR LKVLVLDPSG SEKTFAMGNS  300
SNAQEKQPLP PTVTNLSSED NEVTDLSSAY DEVVGKDTTT SRREQRPLRS CRVEAEKMGS  360
TSCPSTKSGH KAGNSNEAGI EAPMPNKSYI VPKSGRSARA FGLGSRSLQL GPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-11	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG057240.5