PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG056930.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 200aa MW: 21870.8 Da PI: 10.2343 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00038 | 97 | 119 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H TRIDC5BG056930.2 97 FSCNYCHRKFFSSQALGGHQNAH 119 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
RPPPPRHSLC FFFFIDTHTP PRPQLRRPPA RTQYLRPKCR ACLLRPSTME REAPQPHQLL 60 LHGVSLDLRL DTATHEQRGA RRPPTPVALD QAGKEAFSCN YCHRKFFSSQ ALGGHQNAHK 120 LERTLAKRSR DADATAAATA TPSSHWLHGG GRELWAYSAS AAAPDSTTMT PMVGMGWAGT 180 GSTTAAGGES APEMDLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57520.1 | 5e-17 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG056930.2 |