PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG055980.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 155aa    MW: 18280.7 Da    PI: 9.0117
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG055980.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.53.7e-5561331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtdeelv++yLk+kv+g+++el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++
  TRIDC5BG055980.2   6 LPPGFRFHPTDEELVNYYLKRKVHGQSIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGCRTNRATRAGYWKSTGKDRS 97 
                       79****************************.99**************84335556888*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   +++ +g+kktLvfy+grap+g +++Wvmheyr+
  TRIDC5BG055980.2  98 INY-QKRSIGMKKTLVFYQGRAPQGIRSNWVMHEYRI 133
                       **9.9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MAPVGLPPGF RFHPTDEELV NYYLKRKVHG QSIELDIIPE VDLYKCEPWE LAEKSFLPSR  60
DPEWYFFGPR DRKYPNGCRT NRATRAGYWK STGKDRSINY QKRSIGMKKT LVFYQGRAPQ  120
GIRSNWVMHE YRIEESECNN TMGVQENYVV YAWSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.13e-94NAC family protein