PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 898aa MW: 98705.1 Da PI: 7.044

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.5	2.7e-28	582	632	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.5 582 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 632 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
KMMCSPLPPS PCNPNTNASA SDTKIFPRPP SPSNTWFTQD ALLGFEQERR SSEGSFTCME 60 GGDAPPGISM GRAMSSEGDL DLLEQLLSGD NAWLEVAPNT SRSPNFFASP STFLSDATTT 120 TTMPASTNNA LWIQSGSSTV RERLDQALDY IKEMQRDVGM LVQLWVPIKS GEGQLVLSTS 180 GQPFTLDETS ERLRQFREVS TRYQFSADVA SESSPIGLPG RVFIGKLPEW SPDVRYFTSY 240 EYPRVNHAQY LDVHGTMGLP VFEKGSYSCL GVMELIMTRQ KLNFTSEINN ICSALQAVNL 300 RSTEVSNIPR ATKFNSASYK DALPEILEVL RAACVTHKLP LAQTWVTCAQ QGKRGSRHSD 360 ENYRHCISTI DAACYVNDPQ MQNFHESCSD HHLLHEQGVV GKAFTTNQPC FLPDIGSSTK 420 MEYPLSHHAK IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR 480 STCRTLRVVT DKEMGDEAML EVNELSFGPQ GKNKVEELSF GDQATEHREE ASWTSLAGTS 540 KESDLAELSI HGMLSPVGQG LSPAGAQTSA QGSKGKRRTK TEKTVSLPVL RQYFAGSLKD 600 AARSLGVCPT TLKRICRQHG INRWPSRKIK KVDHSLRKLQ QIIDSVHGGE TAFQLNTLYK 660 DLTNTSVSSD NNLSGSVTVP PHKQSNLTDF EGHRHHRLSS NVPSTSHSHS SCSQSSDSSP 720 SSCSGGSTKH PPQAGVDLLM SGNPVNHSPV QTLQTENASI RGHFPVQEAP DLLHNLNQQA 780 LGGQHSSRSP SPPKQNADAG MRIKATFGSE KVRFRLKPEC SFQELKQEMA RRLSIVDTSF 840 LIVKYLDDDL EWVLMTCDAD LQECLHVYKL ANLQTVKISV HLAPIPEARV TIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

KMMCSPLPPS PCNPNTNASA SDTKIFPRPP SPSNTWFTQD ALLGFEQERR SSEGSFTCME  60
GGDAPPGISM GRAMSSEGDL DLLEQLLSGD NAWLEVAPNT SRSPNFFASP STFLSDATTT  120
TTMPASTNNA LWIQSGSSTV RERLDQALDY IKEMQRDVGM LVQLWVPIKS GEGQLVLSTS  180
GQPFTLDETS ERLRQFREVS TRYQFSADVA SESSPIGLPG RVFIGKLPEW SPDVRYFTSY  240
EYPRVNHAQY LDVHGTMGLP VFEKGSYSCL GVMELIMTRQ KLNFTSEINN ICSALQAVNL  300
RSTEVSNIPR ATKFNSASYK DALPEILEVL RAACVTHKLP LAQTWVTCAQ QGKRGSRHSD  360
ENYRHCISTI DAACYVNDPQ MQNFHESCSD HHLLHEQGVV GKAFTTNQPC FLPDIGSSTK  420
MEYPLSHHAK IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR  480
STCRTLRVVT DKEMGDEAML EVNELSFGPQ GKNKVEELSF GDQATEHREE ASWTSLAGTS  540
KESDLAELSI HGMLSPVGQG LSPAGAQTSA QGSKGKRRTK TEKTVSLPVL RQYFAGSLKD  600
AARSLGVCPT TLKRICRQHG INRWPSRKIK KVDHSLRKLQ QIIDSVHGGE TAFQLNTLYK  660
DLTNTSVSSD NNLSGSVTVP PHKQSNLTDF EGHRHHRLSS NVPSTSHSHS SCSQSSDSSP  720
SSCSGGSTKH PPQAGVDLLM SGNPVNHSPV QTLQTENASI RGHFPVQEAP DLLHNLNQQA  780
LGGQHSSRSP SPPKQNADAG MRIKATFGSE KVRFRLKPEC SFQELKQEMA RRLSIVDTSF  840
LIVKYLDDDL EWVLMTCDAD LQECLHVYKL ANLQTVKISV HLAPIPEARV TIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.5