PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG054400.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 2081aa MW: 234761 Da PI: 8.0265

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG054400.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.3e-18	4	91	15	99
-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++p+ +a+++ ++ + t+ +d +g +W++++iyr+ ++r++lt+GW++Fv++++L +gD++vF+ +++++ l+v+++r+ TRIDC5BG054400.5 4 GFSVPRYCAQTIfpqldysADPPVQ--TVLAKDVHGVVWKFRHIYRGLPRRHLLTTGWSSFVNQKKLVAGDSIVFM--RTENGDLCVGFRRA 91 5788888888888888885444444..8999*******************************************..4588889*9996 PP
2	Auxin_resp	106.4	3.2e-35	150	233	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++F+v+Y+Prast+eF+v+++ v++a+++++++GmR km+fe eds + ++ +Gtv++v+ +dp+rWpnS+Wr+L+ TRIDC5BG054400.5 150 AANLAASGQPFNVLYYPRASTPEFCVQAAAVRAAMRTQWCPGMRCKMRFEIEDSWRMSWfMGTVSAVQVADPIRWPNSPWRLLQ 233 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 2081 aa Download sequence
NGGGFSVPRY CAQTIFPQLD YSADPPVQTV LAKDVHGVVW KFRHIYRGLP RRHLLTTGWS 60 SFVNQKKLVA GDSIVFMRTE NGDLCVGFRR AKKGGVGGSE LLRPPSPAAG VNYGGFSMFS 120 RGEEDGINKI LMEACGEMKV RVRPEEVAEA ANLAASGQPF NVLYYPRAST PEFCVQAAAV 180 RAAMRTQWCP GMRCKMRFEI EDSWRMSWFM GTVSAVQVAD PIRWPNSPWR LLQVTWDEPD 240 LLQNFKRVSP WLVELVSNIP AIHLAPFLPP PKKLFVPFYP DLPGDSQFPA HPSESGALVQ 300 VQRLTGRDSA SLPSKAQVQE DQMDEVMQGQ SLMPPELLPL PSAPMSWLSL EHGVTPPLPV 360 DTTANDRFED GLKKRRPEKF RSQGVQTRQI EKRLEKLHTE APVCAMADAM FRLPAKLDRL 420 LACHGRTLPR GAEDEIHLIK QDLEKMMVFI QEQDDSGAED RSMMVKCLTK EVRELSYDME 480 DSVDQYVHAA NSRRGILSPR LKKYKITRRK SKTTTWFSEK LKWRLWMANK IREFSMRSQE 540 ALQRYSLFNH LGENGGNAAA ISGTGCSTCS ISDALFGSWR STPYEEPIGI DAPMEKLEAW 600 LGKDGEQKLK VVSLVGPGGI GKTTLANELY MRIGGQFECR AFVRTSRKPD VRRLLISMLS 660 QIRPHHTPHN WKLHSLIADI RTHLQDKRYL IVIDDVWASQ TWDIINRALP AGNLCSGILI 720 TTEVDDVALK CCGFDSKYVL TMKQLGHDDS SKLFFRTVFG PQYECPPELS EVGDSIIRKC 780 AGLPLATVTI SSLLVNHMGK TEQWHYVNKS LGYGLKTNPT SEGMKQVLNL SYSNLPQHLK 840 PCVMYLSIYE EDYIIQKDDL VKQWVAEGLI HATEEKDKKG ISRSYFDQLI SSRMILPVHT 900 NNDDGVLSCT VHRMVLDFVT QKSLEENFVT TVDHCQTTAS LADKVRRLSL HFGNAEATPP 960 TNMRLSHVRT LAFFGAFKCL PSIVEFGLLQ VLILHLWGDD ESISFDLTRI SELFRLRYLH 1020 VTCNATLQIP QTQMRGLQYL KTLKIDARVS AVPSDIVHLP DLLHLSLPVE TNLPNGIGRM 1080 TSLCTLGYFD LSVNSIDNVQ SLGELTNLQD LRLTCSAVPS SSLKSKMNNM GSILAKLSNL 1140 RSVILEPSSI LDSGSSSMSI SCDSLSSVPS PPVLLQRFEW LPCSCTFSSI PKWFQNLSKL 1200 SILKIGVMEL ASNDVDVLRG FPRLAVLSLY VRAKPAERIV FTKTGFSVLK CFEFRCSVPW 1260 LEFEVDAMPS LLKLKLGFDA QVDQHSTIPV GILHLTVLKE ICVKIGGAGA SDLDKRAAES 1320 AWIDAIKMHP ARPTFNIQCF DKMFNGKDDN NSEVRKEEVE EDSIEKHGVL QMGTREDAHS 1380 RTKIDVQTPA TMSASAIGTM TAIDECVTYS QWAKSAISSP QSRWSGSQER SLWDGLLHLE 1440 SGLQLLKDTL PAMYHIIDEA EWRSHEHHVA KLLPNLKDAV SEAEDFLDEF SWYKMKMQAE 1500 GNARHSTFID FFHSVIQGSF INQVSNVQSR LNHLLGQLKI MRLHGVTKRF DKLVRPETTS 1560 FPNEAKLFGR DKELKQLFEF LNVPANSKRR RATTSVNAST SESASNVGNE SGILSLPVLP 1620 VVGIGGVGKT TLAQHFCSHQ QVKSYFTLIV WICVSDDFDL LRLTKEVIQS CTGKEPISNI 1680 LDFLQRALYE HVRNKRLLIV LDDMWDDALK KNGECWKRFC APFITVQEGS LVLVTTRCPI 1740 VAEGVRTMEP FILEGLKDDT LWDFFKLCMF RSESSNDPEL ESIGRRILPK LKGSPLAAKT 1800 LGRVLSMDLQ ASHWKSILAS ELWELKQEKT DILPALRLSY MYLPFYLKKC FAFCAVYPKD 1860 YKFEKACLAE IWVAEGLVEP QGDVPIQDVG CQYFEDLVAQ SFFQKFSGGY IIPHLLHDMA 1920 KKVSEHDCFI LRNKSDFDKV PQNVRHLYVL PSGDFDEFNL VRLCNYTKLR TLICKKNLKE 1980 KTSFVMDHWC TKLLRMRVVS CAFTNELPDS IGNWKHLRYL EISGACPLKR IPPTLCWLYN 2040 LQILYANKCK LESLPSDFGK LISLQKFESH GLQHYAGGRR T

Sequence ? help Back to Top

Protein Sequence Length: 2081 aa Download sequence

NGGGFSVPRY CAQTIFPQLD YSADPPVQTV LAKDVHGVVW KFRHIYRGLP RRHLLTTGWS  60
SFVNQKKLVA GDSIVFMRTE NGDLCVGFRR AKKGGVGGSE LLRPPSPAAG VNYGGFSMFS  120
RGEEDGINKI LMEACGEMKV RVRPEEVAEA ANLAASGQPF NVLYYPRAST PEFCVQAAAV  180
RAAMRTQWCP GMRCKMRFEI EDSWRMSWFM GTVSAVQVAD PIRWPNSPWR LLQVTWDEPD  240
LLQNFKRVSP WLVELVSNIP AIHLAPFLPP PKKLFVPFYP DLPGDSQFPA HPSESGALVQ  300
VQRLTGRDSA SLPSKAQVQE DQMDEVMQGQ SLMPPELLPL PSAPMSWLSL EHGVTPPLPV  360
DTTANDRFED GLKKRRPEKF RSQGVQTRQI EKRLEKLHTE APVCAMADAM FRLPAKLDRL  420
LACHGRTLPR GAEDEIHLIK QDLEKMMVFI QEQDDSGAED RSMMVKCLTK EVRELSYDME  480
DSVDQYVHAA NSRRGILSPR LKKYKITRRK SKTTTWFSEK LKWRLWMANK IREFSMRSQE  540
ALQRYSLFNH LGENGGNAAA ISGTGCSTCS ISDALFGSWR STPYEEPIGI DAPMEKLEAW  600
LGKDGEQKLK VVSLVGPGGI GKTTLANELY MRIGGQFECR AFVRTSRKPD VRRLLISMLS  660
QIRPHHTPHN WKLHSLIADI RTHLQDKRYL IVIDDVWASQ TWDIINRALP AGNLCSGILI  720
TTEVDDVALK CCGFDSKYVL TMKQLGHDDS SKLFFRTVFG PQYECPPELS EVGDSIIRKC  780
AGLPLATVTI SSLLVNHMGK TEQWHYVNKS LGYGLKTNPT SEGMKQVLNL SYSNLPQHLK  840
PCVMYLSIYE EDYIIQKDDL VKQWVAEGLI HATEEKDKKG ISRSYFDQLI SSRMILPVHT  900
NNDDGVLSCT VHRMVLDFVT QKSLEENFVT TVDHCQTTAS LADKVRRLSL HFGNAEATPP  960
TNMRLSHVRT LAFFGAFKCL PSIVEFGLLQ VLILHLWGDD ESISFDLTRI SELFRLRYLH  1020
VTCNATLQIP QTQMRGLQYL KTLKIDARVS AVPSDIVHLP DLLHLSLPVE TNLPNGIGRM  1080
TSLCTLGYFD LSVNSIDNVQ SLGELTNLQD LRLTCSAVPS SSLKSKMNNM GSILAKLSNL  1140
RSVILEPSSI LDSGSSSMSI SCDSLSSVPS PPVLLQRFEW LPCSCTFSSI PKWFQNLSKL  1200
SILKIGVMEL ASNDVDVLRG FPRLAVLSLY VRAKPAERIV FTKTGFSVLK CFEFRCSVPW  1260
LEFEVDAMPS LLKLKLGFDA QVDQHSTIPV GILHLTVLKE ICVKIGGAGA SDLDKRAAES  1320
AWIDAIKMHP ARPTFNIQCF DKMFNGKDDN NSEVRKEEVE EDSIEKHGVL QMGTREDAHS  1380
RTKIDVQTPA TMSASAIGTM TAIDECVTYS QWAKSAISSP QSRWSGSQER SLWDGLLHLE  1440
SGLQLLKDTL PAMYHIIDEA EWRSHEHHVA KLLPNLKDAV SEAEDFLDEF SWYKMKMQAE  1500
GNARHSTFID FFHSVIQGSF INQVSNVQSR LNHLLGQLKI MRLHGVTKRF DKLVRPETTS  1560
FPNEAKLFGR DKELKQLFEF LNVPANSKRR RATTSVNAST SESASNVGNE SGILSLPVLP  1620
VVGIGGVGKT TLAQHFCSHQ QVKSYFTLIV WICVSDDFDL LRLTKEVIQS CTGKEPISNI  1680
LDFLQRALYE HVRNKRLLIV LDDMWDDALK KNGECWKRFC APFITVQEGS LVLVTTRCPI  1740
VAEGVRTMEP FILEGLKDDT LWDFFKLCMF RSESSNDPEL ESIGRRILPK LKGSPLAAKT  1800
LGRVLSMDLQ ASHWKSILAS ELWELKQEKT DILPALRLSY MYLPFYLKKC FAFCAVYPKD  1860
YKFEKACLAE IWVAEGLVEP QGDVPIQDVG CQYFEDLVAQ SFFQKFSGGY IIPHLLHDMA  1920
KKVSEHDCFI LRNKSDFDKV PQNVRHLYVL PSGDFDEFNL VRLCNYTKLR TLICKKNLKE  1980
KTSFVMDHWC TKLLRMRVVS CAFTNELPDS IGNWKHLRYL EISGACPLKR IPPTLCWLYN  2040
LQILYANKCK LESLPSDFGK LISLQKFESH GLQHYAGGRR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	1e-117	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG054400.5