PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG051980.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRAS

Protein Properties

Length: 557aa MW: 62212.5 Da PI: 8.0124

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG051980.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	63	5.9e-20	470	557	1	91
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 l++lL++cA+av+++d+++++ ++ +l++++s +gdp qRl ay++e+L arla+s++++ykal+++e + ss+ ++++++++e++P++ TRIDC5BG051980.2 470 LKKLLISCARAVEAKDMSAVDMMVPELRKMVSVSGDPHQRLGAYIVEGLVARLASSGHSIYKALKCKEPR---SSDLMSYMHFLYEACPYF 557 5799***************************************************************9...999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MEKVAASYFN ELINRRFIQT LCSKYNNEVL SCTVHDVVHD LIADKCSEEN FNMVIDSSRR 60 NVALPQKVRR LSLLFGDAKC VKTPANMRRS QVRSLTIFGL FESMPSISEF KLLRVLNLQL 120 SGYGDRNTIN LTGISDLFQL RYLKIACDIC IQLPNHMLRL QCLETLVLDS EVTAVPWDII 180 HLPSLLHLSL LVMTNLLDWI GSMRLIGKLN NLRDLHLTYS VPSSDHLKRS MEALGSQLSG 240 HANLKTLALV NGPCHKNAFV CDALKVTVSW EGLVPPPVLE VFEWSLHSCV LTRIPKWIGE 300 LGKLHILKIA VRDLPRDGID AVRGLPALTA LSLYLQTASV ERIVFDKVGF SVLNYFNLRC 360 SVPCLKFEAN AMPNLRKLKI GFNAPRARMD QHGASTAISI DHLASLKEIC AKIRGACADT 420 ESALATAISN HPSNPMINVQ FVDYTFDGDE LTHENKGQDE VLVEGQDGYL KKLLISCARA 480 VEAKDMSAVD MMVPELRKMV SVSGDPHQRL GAYIVEGLVA RLASSGHSIY KALKCKEPRS 540 SDLMSYMHFL YEACPYF

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MEKVAASYFN ELINRRFIQT LCSKYNNEVL SCTVHDVVHD LIADKCSEEN FNMVIDSSRR  60
NVALPQKVRR LSLLFGDAKC VKTPANMRRS QVRSLTIFGL FESMPSISEF KLLRVLNLQL  120
SGYGDRNTIN LTGISDLFQL RYLKIACDIC IQLPNHMLRL QCLETLVLDS EVTAVPWDII  180
HLPSLLHLSL LVMTNLLDWI GSMRLIGKLN NLRDLHLTYS VPSSDHLKRS MEALGSQLSG  240
HANLKTLALV NGPCHKNAFV CDALKVTVSW EGLVPPPVLE VFEWSLHSCV LTRIPKWIGE  300
LGKLHILKIA VRDLPRDGID AVRGLPALTA LSLYLQTASV ERIVFDKVGF SVLNYFNLRC  360
SVPCLKFEAN AMPNLRKLKI GFNAPRARMD QHGASTAISI DHLASLKEIC AKIRGACADT  420
ESALATAISN HPSNPMINVQ FVDYTFDGDE LTHENKGQDE VLVEGQDGYL KKLLISCARA  480
VEAKDMSAVD MMVPELRKMV SVSGDPHQRL GAYIVEGLVA RLASSGHSIY KALKCKEPRS  540
SDLMSYMHFL YEACPYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50600.1	6e-32	GRAS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG051980.2