PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051950.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 469aa    MW: 52199.6 Da    PI: 6.3842
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051950.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4125.6e-126994681373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d  +++ ++  l +++s +g+p+qRl  y++e+L +rla+s++++ykal+ ++ +     e++++++ ++ v+P+lkf
  TRIDC5BG051950.8  99 LKKLLMSCARAVDEKDSLAIDMTVPVLGKNVSVSGKPLQRLGEYMVEGLVTRLASSGHSIYKALKWQKPN---GCEVISYQRELYAVCPYLKF 188
                       5799*************************************************************99998...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++  N aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+ +pfef++l   
  TRIDC5BG051950.8 189 GYVSPNGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyaRGGGLEILGNTLSDIAREFALPFEFHAL-DI 280
                       ********************************************************998899999************************6.66 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +++++e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F++rf+e+l+ y+a+f+s++++ pr
  TRIDC5BG051950.8 281 SVSEVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKRLSPKVVTFVEQELNTNTGPFMQRFTETLDKYTAIFESIDVERPR 373
                       89******************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e +er+k+E+ +l+reivn+vacegaer+erhe ++kW+ rl+++GF+p pls+ +++++++ll+ ++ + y++ e++g l+lgWk++pLv+ 
  TRIDC5BG051950.8 374 EPKERTKMEQYCLAREIVNIVACEGAERVERHEVFGKWKGRLTMVGFRPWPLSSLVNATIRTLLQSYSAN-YQLAERDGVLYLGWKNKPLVVS 465
                       ********************************************************************77.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC5BG051950.8 466 SAW 468
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MPNLQKLKLG FNAPRPRIDQ HGASTAISIG HLPGLREIYA KIRGACADAE SALATAISNH  60
PSNPRISVQL VDYTFDDDEI THDKNEQDEV VEEDRGGYLK KLLMSCARAV DEKDSLAIDM  120
TVPVLGKNVS VSGKPLQRLG EYMVEGLVTR LASSGHSIYK ALKWQKPNGC EVISYQRELY  180
AVCPYLKFGY VSPNGAIAEA VRGEDMIHII DFRISQGVQW ISLIQALAAR PGGPPTVRIT  240
CIDDSESAYA RGGGLEILGN TLSDIAREFA LPFEFHALDI SVSEVEEGHL GVIPGEAVAV  300
NFNLTLHQIP DESVSAANHR DRILRLVKRL SPKVVTFVEQ ELNTNTGPFM QRFTETLDKY  360
TAIFESIDVE RPREPKERTK MEQYCLAREI VNIVACEGAE RVERHEVFGK WKGRLTMVGF  420
RPWPLSSLVN ATIRTLLQSY SANYQLAERD GVLYLGWKNK PLVVSSAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-167GRAS family protein