PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051040.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 184aa    MW: 19012.1 Da    PI: 10.8124
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051040.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702118.87.1e-3797175376
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....aeaaskrkr 76 
                        g++sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrerqqql+a++++aaa++     +++ +kr+r
  TRIDC5BG051040.4  97 GGGTSCQDCGNQAKKDCQHQRCRTCCKSRGFACSTHVKSTWVPASKRRERQQQLTALAASAAATTggagpSRDLTKRPR 175
                       5788****************************************************99999888755555555556555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MAGFPLGTGG SGRDSSASPT GVHPSDASTF LYATRGGGFQ LWGQPQDQQQ LTHPFYAPNL  60
IRFATDDLPA GAAQSLAGAA SSSSSRGARA AALAGTGGGT SCQDCGNQAK KDCQHQRCRT  120
CCKSRGFACS THVKSTWVPA SKRRERQQQL TALAASAAAT TGGAGPSRDL TKRPRARLAG  180
ISRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.13e-24SRS family protein