PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051040.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 309aa    MW: 32039.5 Da    PI: 9.1178
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051040.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702217.92.2e-67972513154
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....aeaaskrkrelkskkqsalsstk 90 
                        g++sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrerqqql+a++++aaa++     +++ +kr+r     ++++ ++++
  TRIDC5BG051040.3  97 GGGTSCQDCGNQAKKDCQHQRCRTCCKSRGFACSTHVKSTWVPASKRRERQQQLTALAASAAATTggagpSRDLTKRPRAR--LAATTPTTSS 187
                       5778****************************************************9999999886666666677777765..3333444444 PP

            DUF702  91 lssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                        +  ++++ + ++++P+evsseavfrcvr++ vd++e+elaYqt+vsigGhvfkGiL+d G+++
  TRIDC5BG051040.3 188 GTYWDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAELAYQTTVSIGGHVFKGILHDVGPSN 251
                       44556778889999***********************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAGFPLGTGG SGRDSSASPT GVHPSDASTF LYATRGGGFQ LWGQPQDQQQ LTHPFYAPNL  60
IRFATDDLPA GAAQSLAGAA SSSSSRGARA AALAGTGGGT SCQDCGNQAK KDCQHQRCRT  120
CCKSRGFACS THVKSTWVPA SKRRERQQQL TALAASAAAT TGGAGPSRDL TKRPRARLAA  180
TTPTTSSGTY WDQQMVTVAE RFPREVSSEA VFRCVRLGPV DQAEAELAYQ TTVSIGGHVF  240
KGILHDVGPS NAHAQLQAAA GGSAGDAGGG NNHNIVVSSA VVMDPYPTPG LYGSFPATTP  300
FFHGHPYQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.11e-42SRS family protein