PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG051040.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SRS | ||||||||
Protein Properties | Length: 334aa MW: 34341.9 Da PI: 8.9263 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 221.2 | 2.1e-68 | 101 | 252 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssae 95 g++sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrerqqql+a++++aaa++ a + r+ +++ +++ a+++ ++ss++ TRIDC5BG051040.2 101 GGGTSCQDCGNQAKKDCQHQRCRTCCKSRGFACSTHVKSTWVPASKRRERQQQLTALAASAAATTGGAGPSRDLTKRPRARLAATTPTTSSGD 193 5778*********************************************************999988888888888899999999999***** PP DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ + ++++P+evsseavfrcvr++ vd++e+elaYqt+vsigGhvfkGiL+d G+++ TRIDC5BG051040.2 194 QQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAELAYQTTVSIGGHVFKGILHDVGPSN 252 ********************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
GFGRMAGFPL GTGGSGRDSS ASPTGVHPSD ASTFLYATRG GGFQLWGQPQ DQQQLTHPFY 60 APNLIRFATD DLPAGAAQSL AGAASSSSSR GARAAALAGT GGGTSCQDCG NQAKKDCQHQ 120 RCRTCCKSRG FACSTHVKST WVPASKRRER QQQLTALAAS AAATTGGAGP SRDLTKRPRA 180 RLAATTPTTS SGDQQMVTVA ERFPREVSSE AVFRCVRLGP VDQAEAELAY QTTVSIGGHV 240 FKGILHDVGP SNAHAQLQAA AGGSGGGGGD YQFRLTGDVS PPSTGAEAGD AGGGNNHNIV 300 VSSAVVMDPY PTPGLYGSFP ATTPFFHGHP YQRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 5e-43 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG051040.2 |