PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG050750.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 249aa MW: 27502.6 Da PI: 4.7583 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61 | 1.8e-19 | 27 | 79 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +f++eq++ Le++F+ + ++ +++ +LA++lgL+ rqV +WFqN+Ra++k TRIDC5BG050750.2 27 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 79 456*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 122.9 | 1.6e-39 | 26 | 117 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+r+s+eq+k+LE++F +++kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE++y+aL++ ydal ++ ++L+k++++L ++l++ TRIDC5BG050750.2 26 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAALRDDYDALLSSYDQLKKDKQALVNQLEK 117 8***************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MEQGEEDGDW MMEPAAGKKG GVMIDRKKRF SEEQIKSLES MFATQTKLEP RQKLQLAREL 60 GLQPRQVAIW FQNKRARWKS KQLERQYAAL RDDYDALLSS YDQLKKDKQA LVNQLEKLAE 120 MLREPGGAKC GDNAGAAARD DVRLAVAGMS MKDEFVDAGG ASKLYSASEG CGGSGKLSLF 180 GEDDDDAGLF LRPSLQLPTA HDGGFTASGP AEYQQQSPSS FPFHSSWPSS AAEQTCSSSQ 240 WWEFESPSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 8e-43 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG050750.2 |