PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG050400.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 787aa MW: 84689.8 Da PI: 5.8511 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.4 | 1.9e-21 | 60 | 115 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p++++r eL+++l+L+ rqVk+WFqNrR+++k TRIDC5BG050400.7 60 KKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMK 115 688999***********************************************999 PP | |||||||
2 | START | 168.9 | 3.3e-53 | 272 | 497 | 4 | 205 |
HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 ++a++elvk ++++p+W s e +n de+++ f++ + + +ea r++g+ + ++++lv++l++ +W+e+++ +a+t+e TRIDC5BG050400.7 272 LAAMEELVKVTQVDDPLWQPSLdiglETLNFDEYRRAFARVLGpspagYVSEATREVGIAIINSVDLVNSLMNEV-RWSEMFPcvvaRASTME 363 789*******************9***************88666********************************.***************** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--......-TTSEE-EESSEEEEEEEECTCEEEE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.....sssvvRaellpSgiliepksnghskv 164 is g g +qlm aelq+lsplvp R+++f+R+++q+ +g w+ivdvSvd p + ++++ ++llpSg+++e+++ng+ kv TRIDC5BG050400.7 364 IISCGmggtrsGSIQLMRAELQVLSPLVPiREVTFLRFCKQHADGLWAIVDVSVDGVLRPDSgtgagPAGYMGCRLLPSGCIVEDMQNGYAKV 456 *******************************************************99888877778789************************ PP EEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 165 twvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205 twv h++++++ +h+l+r+l++sg+a ga++w+a lqrqce TRIDC5BG050400.7 457 TWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASLQRQCE 497 ****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 787 aa Download sequence |
MEGGGQLGGA FMGSTGSGGD GDSLGRARED ENDSRSGSDN LDGASADELD PDNSNPRKKK 60 KRYHRHTPQQ IQELEAVFKE CPHPDEKQRM ELSRRLNLES RQVKFWFQNR RTQMKTQIER 120 HENALLRQEN DKLRTENMTI REAMRSPTCG NCGGAAVLGE VSLEEQHLRI ENSRLKDELD 180 RVCALAGKFL GRPVSAISSP LSLPSSLCSG LDLAVGSNNG FMGMGMQSIP DLMGGGSAAM 240 RLPAGIMGGG LDDGLGGDGG AIDRGALLEL GLAAMEELVK VTQVDDPLWQ PSLDIGLETL 300 NFDEYRRAFA RVLGPSPAGY VSEATREVGI AIINSVDLVN SLMNEVRWSE MFPCVVARAS 360 TMEIISCGMG GTRSGSIQLM RAELQVLSPL VPIREVTFLR FCKQHADGLW AIVDVSVDGV 420 LRPDSGTGAG PAGYMGCRLL PSGCIVEDMQ NGYAKVTWVV HAEYDEAAVH ELYRPLLRSG 480 QALGARRWLA SLQRQCEYHA ILCSNPHPNH GDRHEAISPA GRRCMLRLAQ RMADNFCAGV 540 CATAAQKWRR LDEWRVEGAG GRDPAGGEDK VRMMARQSVG APGEPPGVVL SATTSVRLPG 600 TLPQRVFDYL RDEQRRGEWD ILANGEAMQE MDHIAKGQHH GNAVSLLRPN ATSGNQNNML 660 ILQETCTDAS GSLVVYAPVD VQSMHVVMGG GDSAYVSLLP SGFAILPDGH TTPATATDPS 720 PQGSSPNAHA GSSNNNPGSL VTVAFQILVN NLPTAKLTVE SVDTVSNLLS CTIQKIKSAL 780 QASIISP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 62 | RKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG050400.7 |