PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050190.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 236aa    MW: 25332.1 Da    PI: 4.7538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050190.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-1758108153
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkl 53 
                       + y+GVr++ + grWv+e+r+p   g +  r +lg+f+tae Aa+a +aa+ +l
  TRIDC5BG050190.5  58 PVYRGVRRRGNAGRWVCEVRVP---GrRGSRLWLGTFDTAEAAARANDAAMIAL 108
                       68*******************9...6455*********************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MCPIKKEMSG ESGSPCSGEN FYSPSTSREH QQAKQAAWTS APAKRPAGRT KFRETRHPVY  60
RGVRRRGNAG RWVCEVRVPG RRGSRLWLGT FDTAEAAARA NDAAMIALSA GGAGCLNFAD  120
SAELLAVPAA SSYRSLDEVR HAVVEAVEDF LRREAIAEED ALSGTSSSAP SSLTDDESSS  180
SPPEDSPFEL DVLSDMGWDL YYASLAQAML MAPPSSMAAA LGDYGEVDVP LWSYQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-27ERF family protein