PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG050150.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 26435.2 Da PI: 4.489 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.3e-17 | 53 | 105 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + rWv+e+r+p ++g +r +lg+++tae Aa+a +aa+++l g TRIDC5BG050150.2 53 PVYRGVRRRGNAERWVCEVRVPGKRG--ARLWLGTYDTAELAARANDAAMLALGG 105 68*******************95544..***********************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
PSTQPVAMDM GLEVSSSSPS SSSVSSSPEH AAGRASLAKR PAGRTKFRET RHPVYRGVRR 60 RGNAERWVCE VRVPGKRGAR LWLGTYDTAE LAARANDAAM LALGGRSAAC LNFADSAWLL 120 AVPSALSDLG DVRRAAVEAV ANLQRRKAGN GSLTATVTEE ASCDAPEESS SESDSAGSSE 180 TSEPSADREF EVPVAVDTDM FGLDLFPEMD LCSYYASLAE ALLVDPPARV TTTDTYWDNG 240 DGGADVALWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 2e-29 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG050150.2 |