PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG050120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23407.2 Da PI: 5.3638 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.9 | 3.3e-15 | 32 | 89 | 1 | 55 |
AP2 1 sgykGVrwdkkrgr..WvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + g+ Wv+e+r+p + ++ r++lg+f +e+Aa+a++ a+++l g TRIDC5BG050120.1 32 PVYRGVRRRGREGQwvWVCELRVPAAGSrVYSRIWLGTFADPEMAARAHDSAALALSG 89 68************7777*****96555788***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 212 aa Download sequence |
MTVWPEEEYR TVWSEPPKRR AGRNKLQETR HPVYRGVRRR GREGQWVWVC ELRVPAAGSR 60 VYSRIWLGTF ADPEMAARAH DSAALALSGR DACLNFADSA WRMMPVHAAG SFKMAAAQEI 120 KDAVAVALKA FQELQCPADV SKAPSSTSEE SAPSITSSDL SGLDDEHWIG GMDAGSYYAN 180 LAQGMLMEPP AAGGWREDRE QDDGVGTSLW TY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25470.1 | 3e-25 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG050120.1 |