PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG049640.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 1084aa MW: 121089 Da PI: 4.777

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG049640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.9	1.1e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l TRIDC5BG049640.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.6	1.8e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l TRIDC5BG049640.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1084 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD ENYEPNDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDNRHK KRKRKGIDYN AEIPFEKRPP PGFYDTVGED RPLEHVQFPT 240 TIEELEGRRR VDVEAQLRKQ DIAKNKILQR QDAPAAIMQA NKLNDPEAVT RRSKLMLPPP 300 QISDHELEEI AKMGNAGDPA LAEELGEGST ATRTLLANYS QTPRLGMTPL RTPQRTPGGK 360 GDAIMMEAEN LARLRESQTP LLGGDNPELH PSDFSGVTPR KKEIQTPNPM ATPLASPGPG 420 VTPRIGLTPS RDGNSFGLTP KGTPFRDELH INEEVEMQDS AQLELRRQAE LRRGLRSGFA 480 SIPQPKNEYQ IVMPPITEEK EEAEERIEED MSDRLARERA EEQARQEALL RKRSKVLQRS 540 LPRPPAASVE ILRQSLIKGG ESRSTFVPPT SLEQADELIN EELLRLLEHD NAKYPLDEQT 600 QREKKKGSKR QANGAAFIPE IEGFDEHELK EASFMVEEEI QYLRVAMGHE NESFEDFVKS 660 HDACQEDLMF FPTNNSYGLA SVAGNADKIS ALQHEFEMVK KRMDDEAKKA SRLEQKIKLL 720 TQGYQARAAK LGSQIQDTFK QMNTAATELE CFQELQKQEQ MAGAYRVRNL SEEVNKQKAL 780 EQTLQSRYGD LLSGYQSIHG QLEEHKRLLK LQEEAIEAEN RAKEEAIEAE NRAKEEALEA 840 ENRAKAEAIE AENRAKEEAL EAENRAKEEA IEAENRAKEE ALEAENRAKE EEAAARNRAA 900 EEENERKNHA IQEESGQTTK VTDEEAAGRK EINGDQMDMD SADVAGELVG PIPPLPDTVD 960 NDGASIEQST SNAQSGDTVT VNEGAIDKVD SSKLDGQDNT SCSMDIDAGS QEEGKNVLAA 1020 AATSVDVGNT PVSSDQAVSN EGSDAVHAPV SSDQAVSNEG SDAVHAPVSS DQAAPNEESG 1080 MVPE

Sequence ? help Back to Top

Protein Sequence Length: 1084 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD ENYEPNDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDNRHK KRKRKGIDYN AEIPFEKRPP PGFYDTVGED RPLEHVQFPT  240
TIEELEGRRR VDVEAQLRKQ DIAKNKILQR QDAPAAIMQA NKLNDPEAVT RRSKLMLPPP  300
QISDHELEEI AKMGNAGDPA LAEELGEGST ATRTLLANYS QTPRLGMTPL RTPQRTPGGK  360
GDAIMMEAEN LARLRESQTP LLGGDNPELH PSDFSGVTPR KKEIQTPNPM ATPLASPGPG  420
VTPRIGLTPS RDGNSFGLTP KGTPFRDELH INEEVEMQDS AQLELRRQAE LRRGLRSGFA  480
SIPQPKNEYQ IVMPPITEEK EEAEERIEED MSDRLARERA EEQARQEALL RKRSKVLQRS  540
LPRPPAASVE ILRQSLIKGG ESRSTFVPPT SLEQADELIN EELLRLLEHD NAKYPLDEQT  600
QREKKKGSKR QANGAAFIPE IEGFDEHELK EASFMVEEEI QYLRVAMGHE NESFEDFVKS  660
HDACQEDLMF FPTNNSYGLA SVAGNADKIS ALQHEFEMVK KRMDDEAKKA SRLEQKIKLL  720
TQGYQARAAK LGSQIQDTFK QMNTAATELE CFQELQKQEQ MAGAYRVRNL SEEVNKQKAL  780
EQTLQSRYGD LLSGYQSIHG QLEEHKRLLK LQEEAIEAEN RAKEEAIEAE NRAKEEALEA  840
ENRAKAEAIE AENRAKEEAL EAENRAKEEA IEAENRAKEE ALEAENRAKE EEAAARNRAA  900
EEENERKNHA IQEESGQTTK VTDEEAAGRK EINGDQMDMD SADVAGELVG PIPPLPDTVD  960
NDGASIEQST SNAQSGDTVT VNEGAIDKVD SSKLDGQDNT SCSMDIDAGS QEEGKNVLAA  1020
AATSVDVGNT PVSSDQAVSN EGSDAVHAPV SSDQAVSNEG SDAVHAPVSS DQAAPNEESG  1080
MVPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	203	KKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRHKKRK
2	186	205	KRRELKAAGIDNRHKKRKRK
3	200	205	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG049640.1